Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq21 205 8e-48 seq20 104 2e-17 >seq21 Length=517387 Score = 205 bits (226), Expect = 8e-48 Identities = 361/526 (69%), Gaps = 0/526 (0%) Strand=Plus/Plus Query 23353 CATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTT 23412 ||| || || || || ||||| || ||| |||| || || | |||||| |||||||| || Sbjct 16633 CATGAAGAGGTCGGGAATCCAGAGGGCGAAGAAGAGATCCCTGGCGCGAACCTCCTCCTT 16692 Query 23413 GCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTA 23472 |||| |||||| | || | || || || | ||| || ||||| || |||||||| Sbjct 16693 GCCGTGGTTCTTGCGAAGGTCGAGGAACTCGAAGATGTCGGCGTGCCATGGTTCGAGGTA 16752 Query 23473 AACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTT 23532 | ||| || || || || | ||| || || ||||| || ||||| || ||||||||||| Sbjct 16753 GATGGCGAAGGCTCCGGGGCGCTTGTTTCCTCCCTGGTCAACGTAGCGAGCCGTGTTGTT 16812 Query 23533 GTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGA 23592 ||| || | ||||| || | || ||||| || |||| || || | ||| Sbjct 16813 GTAGACACGGAGCATAGGGATGATGCCGTTCGAGTAGCCGTTGGTTCCGGCGATGTACGA 16872 Query 23593 ACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCAT 23652 || | || || | |||||| | | || || || |||||| ||| || || || | Sbjct 16873 GCCAGTCGCGCGGATGTTGTGGATGCTGAGTCCGATTCCTCCGGCCGTCTTGGAGATGAG 16932 Query 23653 CGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAA 23712 ||||| || || ||||||||||| |||||||| ||| || || | | ||| | Sbjct 16933 GGCGCAGGTCTTGAGCGTGTCGTAGATACCCTCGATCGAGTCGTCCTTCATGGTGACGAG 16992 Query 23713 GAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTG 23772 ||| || || || | || | | || || |||| ||| || ||||| |||||| Sbjct 16993 GAAGCAGGAGGAGAGCTGGGGGTGAGGAGTTCCGGCGTTGAAGAGGGTCGGCGAGGCGTG 17052 Query 23773 CGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCC 23832 || ||||| | | |||||| || ||||||| | || || ||||||||| || Sbjct 17053 GGTGAAGTAGCGCTCCGACATGAGGTTGTACGACTGGAGAACGCGCTCAATGTCCGAGCC 17112 Query 23833 GTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG 23878 ||| ||||||| ||||| ||||| | ||||| ||||||| |||| Sbjct 17113 GTGGATACCGACAGCGACACGCATGAGCATGTGCTGAGGTCGCTCG 17158 >seq20 Length=589438 Score = 104 bits (114), Expect = 2e-17 Identities = 182/264 (69%), Gaps = 6/264 (2%) Strand=Plus/Minus Query 58029 ATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATA 58088 || || ||| | ||||| |||||||| |||||||| || || || ||||||| | || Sbjct 425239 ATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGACTCACCTTCTCCAACGAGCTCATC 425180 Query 58089 TCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAAT 58148 ||||||||||| || || || || || ||||| ||||| |||| |||||| | | | Sbjct 425179 TCGCGCGACGAAGGCCTTCACACCGACTTTGCCTGCCTCATGTTCTCTCATCTCGAGCGT 425120 Query 58149 AAACCGACGCGGGATCGCATCTTGGACATTATCA---CCGAGGCGGTCGCGATCGAAAAT 58205 || | || || | | || || |||| |||||| |||| ||| || || Sbjct 425119 CGCCCTCACCCCGA---CACCGTCGAGATGATCATCCGCGAGGCCGTCGAGATTGAGAAG 425063 Query 58206 GAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCA 58265 ||||| ||||||| ||||| || || || | |||| |||||| | |||| Sbjct 425062 GAGTTCCTCACCGAGGCCCTCCCCGTCTCCCTCATCGGAATGAACGCCACCCTCATGTGC 425003 Query 58266 AAGTACATTGAGTTTGTTGCCGAC 58289 ||||||| ||||| || |||||| Sbjct 425002 CAGTACATCGAGTTCGTCGCCGAC 424979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765720206240