Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq21 174 2e-38 seq11 86.0 9e-12 >seq21 Length=517387 Score = 174 bits (192), Expect = 2e-38 Identities = 412/620 (66%), Gaps = 2/620 (0%) Strand=Plus/Plus Query 79863 GAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCA 79922 ||||||||| || | || |||| | ||| ||| ||| | || || | | | ||| Sbjct 16549 GAACTCGTCGCCGTACACCTCGTGGAGTCCGGGAGCCTCGGCGGGGCAGAAGAGGGGCCA 16608 Query 79923 CTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 79982 || || | |||| || || | ||| ||||| || |||||||| || || | || || Sbjct 16609 GTCGCCGGCCTCCTCGACACGCTCCATGAAGAGGTCGGGAATCCAGAGGGCGAAGAAGAG 16668 Query 79983 ATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 80042 ||| |||| | | |||||| || || ||||| ||| ||||||||| | | || Sbjct 16669 ATCCCTGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGAAGGTCGAGGAACTCGAAGAT 16728 Query 80043 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTG 80102 || | ||||| ||||| | ||| ||||| | |||| || || |||||||||||||| Sbjct 16729 GTCGGCGTGCCATGGTTCGAGGTAGATGGCGAAGGCTCCGGGGCGCTTGTTTCCTCCCTG 16788 Query 80103 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGT 80162 || | ||| | ||| ||||| || || || | | ||| || || || || || || || Sbjct 16789 GTCAACGTAGCGAGCCGTGTTGTTGTAGACACGGAGCATAGGGATGATGCCGTTCGA-GT 16847 Query 80163 A-CCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTA 80221 | || ||||| |||| ||| || ||| | || || || || || || || | Sbjct 16848 AGCCGTTGGTTCCGGCGATGTACGAGCCAGTCGCGCGGATGTTGTGGATGCTGAGTCCGA 16907 Query 80222 TTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTA 80281 |||| || ||| | || ||||| | ||||| || | ||| || ||||| ||||| | Sbjct 16908 TTCCTCCGGCCGTCTTGGAGATGAGGGCGCAGGTCTTGAGCGTGTCGTAGATACCCTCGA 16967 Query 80282 TGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCG 80341 | || || ||||| | | || || ||| || | ||| | || |||||| | Sbjct 16968 TCGAGTCGTCCTTCATGGTGACGAGGAAGCAGGAGGAGAGCTGGGGGTGAGGAGTTCCGG 17027 Query 80342 CATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCT 80401 | || || | ||| || || ||||| || || | || |||| || ||||||| || Sbjct 17028 CGTTGAAGAGGGTCGGCGAGGCGTGGGTGAAGTAGCGCTCCGACATGAGGTTGTACGACT 17087 Query 80402 CAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCT 80461 | | | || || ||| | || || || || ||||||||||| | |||||||| Sbjct 17088 GGAGAACGCGCTCAATGTCCGAGCCGTGGATACCGACAGCGACACGCATGAGCATGTGCT 17147 Query 80462 GAGGTCTTTCAACGATCTTG 80481 |||||| || ||| |||| Sbjct 17148 GAGGTCGCTCGGCGACCTTG 17167 >seq11 Length=836129 Score = 86.0 bits (94), Expect = 9e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||||||| |||||| || ||||| | || ||||||||||| || ||| Sbjct 272063 CAAGCGAAATCGGTGTGCAGCCCTTCGTCCCGTGAGATGAGTTCGTTGGAGAAGCAGAGA 272004 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCC 50069 |||||||| ||||| |||||||| |||||||| ||||| || || || || Sbjct 272003 CCGGGCATGAGGCCTCGCTTTTTGAGCCAAAAGATGGAGGCGAAGGAGCC 271954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718267704640080