Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq21 113 7e-20 seq20 107 3e-18 >seq21 Length=517387 Score = 113 bits (124), Expect = 7e-20 Identities = 288/436 (66%), Gaps = 2/436 (0%) Strand=Plus/Minus Query 96806 AACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACG 96865 ||| |||||| || | | ||| | | || |||||| | | ||||| | | | || Sbjct 16858 AACCAACGGCTACTCGAACGGCATCATCCCTATGCTCCGTGTCTACAACAACACGGCTCG 16799 Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925 |||||| ||||| || || || || || || || | ||| ||||| | ||||| || Sbjct 16798 CTACGTTGACCAGGGAGGAAACAAGCGCCCCGGAGCCTTCGCCATCTACCTCGAACCATG 16739 Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985 |||||| ||| | || || || |||| | ||||| ||| ||| || |||| || Sbjct 16738 GCACGCCGACATCTTCGAGTTCCTCGACCTTCGCAAGAACCACGGCAAGGAGGAGGTTCG 16679 Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGA 97045 |||||||| | || | || |||||| | || || | |||||| |||| ||| | || Sbjct 16678 CGCCAGGGATCTCTTCTTCGCCCTCTGGATTCCCGACCTCTTCATGGAGCGTGTCGAGGA 16619 Query 97046 CGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGG 97105 | ||| ||||| ||| | ||||||| | | | ||||| || ||| | || Sbjct 16618 GGCCGGCGACTGGCCCCTCTTCTGCCCCGCCGAGGCTCCCGGACTCCACGAGGTGTACGG 16559 Query 97106 CGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGA-GACGAG 97164 ||| ||||| |||| | || |||||| | ||||| || | || ||| | Sbjct 16558 CGACGAGTTCAAGGCTCTCTTCAACAAGTACGAGAAGGAGGGTCGCGCCAAGAAGACCA- 16500 Query 97165 TCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224 || || | | | |||||| | ||||| | ||||||||| ||||| || | || | Sbjct 16499 TCCCCGCGCAAAAGCTGTGGTACGCCATTCTCGAGGCTCAGGTCGAGACCGGTAACCCCT 16440 Query 97225 ACATTCTCTACAAGGA 97240 ||| ||||||||||| Sbjct 16439 TCATGCTCTACAAGGA 16424 Score = 87.8 bits (96), Expect = 3e-12 Identities = 128/176 (73%), Gaps = 4/176 (2%) Strand=Plus/Minus Query 98037 ATCTACAAGACTGTCTGGGAGAT-TCCGACCAAGACGCTGATCGATATGGCTGCCGACAG 98095 ||||||||||| ||||||||||| ||| | ||||| | ||||| | | |||||| | Sbjct 15271 ATCTACAAGACCGTCTGGGAGATCTCCCA-GAAGACCATCATCGACCTCTCGGCCGACCG 15213 Query 98096 AGGTGTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAG-CCCACCTACA 98154 || | || || |||||||| || ||| |||| | || ||| |||| |||||| Sbjct 15212 TGGAGCCTTTATCGACCAGAGCCAGTCGCTCAACATTCAC-TTGTCGAGCCCCACCATGG 15154 Query 98155 GTCGTATGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATG 98210 | | || ||||| ||||| |||| |||||| | ||| |||||||| |||||| Sbjct 15153 CCCAGCTCACCTCGATGCACTTCTACGGATGGAAGAGGGGACTCAAGACCGGCATG 15098 >seq20 Length=589438 Score = 107 bits (118), Expect = 3e-18 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 125030 GTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCT 125089 |||||| |||||| |||||||||| ||||| | ||||||| | || || ||||||||| | Sbjct 425888 GTACAAGAAGGCTGAGGCCTCCTTCTGGACCGCCGAAGAGATGGACCTTTCCAAGGACAT 425829 Query 125090 GTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGC 125149 | |||| ||||| | | | || ||||| | ||||| |||| | | || Sbjct 425828 GCACGACTGGGACAACAAGCTCAAGGAGGACGAGCGCTACTTTATCCAGCACGTCCTCGC 425769 Query 125150 CTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGATTCTCTCAAGA 125209 |||||| |||| || ||||| ||||||||||| || ||| | || ||||| || Sbjct 425768 CTTCTTCGCCGCTTCGGATGGTATCGTCAACGAGAACCTGCTCGAGCGCTTCTCGTCCGA 425709 Query 125210 GTTGACCATTC-CAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGAT 125257 | || | | | | |||| ||| ||||| ||||||||||| |||||||| Sbjct 425708 GGTG-CAGTGCGCCGAGG-CTCGTTGCTTCTACGGATTCCAGATCATGAT 425661 Score = 98.7 bits (108), Expect = 1e-15 Identities = 229/341 (67%), Gaps = 21/341 (6%) Strand=Plus/Minus Query 125479 CCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTA 125538 ||||||| ||||||||||||||||| |||||||||||||| || | |||||| | | Sbjct 425241 CCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGACTCACCTTCTCCAACGAGCTCA 425182 Query 125539 TATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT--ATC 125595 | || || ||||| ||||| ||| ||||||||| || |||| || || || | | Sbjct 425181 TCTCGCGCGACGAAGGCCTTCACACCGACTTTGCCTGCCTCATGTTCTCTCATCTCGAGC 425122 Query 125596 TGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGA 125655 || ||| | || || || || | | ||||| ||| ||||| Sbjct 425121 GTCG-CCCTCACCCCGA--CACCGTCGAGATGATCATC---------CGCGAGGCCGTCG 425074 Query 125656 GGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCA 125715 ||| || | ||||| || ||||| |||| || ||| | | || || |||||| || Sbjct 425073 AGATTGAGAAGGAGTTCCTCACCGAGGCCCTCCCCGTCTCCCTCATCGGAATGAACGCCA 425014 Query 125716 AGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGG-- 125773 || |||||| ||||||| ||||| || || || || || || | | | || Sbjct 425013 CCCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTCCT---TGTCTCCCTCGGCA 424957 Query 125774 -CCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATG 125813 || |||| ||||||| | | |||| ||||| || |||||| Sbjct 424956 ACCCCAAGGTTTACAAGGTCGAGAACCCCTTCGACTTCATG 424916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058069884720