Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq11 129 9e-26 seq13 120 5e-23 >seq11 Length=836129 Score = 129 bits (142), Expect = 9e-26 Identities = 103/124 (83%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| |||||||||||||| |||||||||||||| ||||| ||||| || Sbjct 441662 CGCGACAACATCCAGGGAATCACCAAGCCCGCTATCCGTCGTCTCGCTCGCCGTGGAGGT 441721 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| ||||||| | |||| || |||| |||| |||| | |||||||||||| Sbjct 441722 GTCAAGCGTATCTCTGGCCTCATCTACGAGGAGACCCGTGGTGTTCTCAAGATCTTCCTC 441781 Query 16577 AAGA 16580 ||| Sbjct 441782 GAGA 441785 Score = 125 bits (138), Expect = 1e-24 Identities = 102/124 (82%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| |||||||||||||| || ||||| ||||| ||||||||||| ||| Sbjct 8299 CGCGACAACATCCAGGGAATCACCAAGCCCGCCATCCGCCGTCTCGCTCGTCGTGGAGGA 8240 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| ||| | |||| || |||| ||| | ||| | |||||||||||| Sbjct 8239 GTCAAGCGTATCTCGGGACTCATCTACGAGGAGACTCGCGGTGTCCTCAAGATCTTCCTC 8180 Query 16577 AAGA 16580 ||| Sbjct 8179 GAGA 8176 >seq13 Length=743395 Score = 120 bits (132), Expect = 5e-23 Identities = 101/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| |||||||||||||| |||||||| ||||| ||||| ||||| || Sbjct 214924 CGCGACAACATCCAGGGAATCACCAAGCCCGCTATCCGCCGTCTCGCTCGCCGTGGAGGT 214983 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| ||||||| | |||| || |||| || | |||| | |||||||||||| Sbjct 214984 GTCAAGCGTATCTCTGGCCTCATCTACGAGGAGACCCGCGGTGTTCTCAAGATCTTCCTC 215043 Query 16577 AAGA 16580 ||| Sbjct 215044 GAGA 215047 Score = 111 bits (122), Expect = 2e-20 Identities = 99/124 (80%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || ||||| || |||||||||||||| |||||||| ||||| ||||| ||||| || Sbjct 280955 CGCGACAACATTCAGGGAATCACCAAGCCCGCTATCCGCCGTCTCGCTCGCCGTGGAGGT 280896 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| ||||||| | | || || |||| || | |||| | |||||||||||| Sbjct 280895 GTCAAGCGTATCTCTGGCCTCATTTACGAGGAGACCCGCGGTGTTCTCAAGATCTTCCTC 280836 Query 16577 AAGA 16580 ||| Sbjct 280835 GAGA 280832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075088454546