Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq21 170 2e-37 seq11 91.5 2e-13 seq20 84.2 3e-11 >seq21 Length=517387 Score = 170 bits (188), Expect = 2e-37 Identities = 375/562 (67%), Gaps = 0/562 (0%) Strand=Plus/Plus Query 63197 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63256 ||| || ||| | |||| || || | ||| ||||| || |||||||| || || | || Sbjct 16606 CCAGTCGCCGGCCTCCTCGACACGCTCCATGAAGAGGTCGGGAATCCAGAGGGCGAAGAA 16665 Query 63257 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63316 ||||| |||| | | ||||| || || ||||| ||| ||||||||| | | Sbjct 16666 GAGATCCCTGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGAAGGTCGAGGAACTCGAA 16725 Query 63317 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63376 || || | ||||| ||||| | ||| ||||| | |||| || || ||||||||||| Sbjct 16726 GATGTCGGCGTGCCATGGTTCGAGGTAGATGGCGAAGGCTCCGGGGCGCTTGTTTCCTCC 16785 Query 63377 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63436 ||| || | ||| | ||| ||||| || || || | | ||| || || || ||||| || Sbjct 16786 CTGGTCAACGTAGCGAGCCGTGTTGTTGTAGACACGGAGCATAGGGATGATGCCGTTCGA 16845 Query 63437 TATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 63496 || ||||| |||| ||| || ||| | || || || || || || || Sbjct 16846 GTAGCCGTTGGTTCCGGCGATGTACGAGCCAGTCGCGCGGATGTTGTGGATGCTGAGTCC 16905 Query 63497 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTC 63556 ||||| || ||| | || ||||| | ||||| || | |||||| ||||||||||| Sbjct 16906 GATTCCTCCGGCCGTCTTGGAGATGAGGGCGCAGGTCTTGAGCGTGTCGTAGATACCCTC 16965 Query 63557 TATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 63616 || || || ||||| | | || || ||| || | ||| | || |||||| Sbjct 16966 GATCGAGTCGTCCTTCATGGTGACGAGGAAGCAGGAGGAGAGCTGGGGGTGAGGAGTTCC 17025 Query 63617 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 63676 || || || | ||| || || ||||| || || | || || | || ||||||| Sbjct 17026 GGCGTTGAAGAGGGTCGGCGAGGCGTGGGTGAAGTAGCGCTCCGACATGAGGTTGTACGA 17085 Query 63677 CTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTG 63736 || | | | || || ||| | || || || || ||||||||||| | |||||| Sbjct 17086 CTGGAGAACGCGCTCAATGTCCGAGCCGTGGATACCGACAGCGACACGCATGAGCATGTG 17145 Query 63737 CTGAGGTCTTTCAACGATCTTG 63758 |||||||| || ||| |||| Sbjct 17146 CTGAGGTCGCTCGGCGACCTTG 17167 >seq11 Length=836129 Score = 91.5 bits (100), Expect = 2e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || ||||||||| |||||| || ||||| | || ||||||||||| || ||| Sbjct 272063 CAAGCGAAATCGGTGTGCAGCCCTTCGTCCCGTGAGATGAGTTCGTTGGAGAAGCAGAGA 272004 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCC 33413 |||||||| ||||| |||||||| |||||||| ||||| ||||| || || Sbjct 272003 CCGGGCATGAGGCCTCGCTTTTTGAGCCAAAAGATGGAGGCGAAGGAGCC 271954 >seq20 Length=589438 Score = 84.2 bits (92), Expect = 3e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 ||||| | || || || ||| ||| || || ||||| | || || |||||||| Sbjct 425136 AACATGAGGCAGGCAAAGTCGGTGTGAAGGCCTTCGTCGCGCGAGATGAGCTCGTTGGAG 425195 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCC 33413 || |||||||||||||| ||||| ||||| || ||||| || ||||| ||||| ||||| Sbjct 425196 AAGGTGAGTCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGATCC 425254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946250005520