Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq6 125 7e-24 seq13 109 5e-19 seq1 102 8e-17 seq25 100 3e-16 >seq6 Length=1242253 Score = 125 bits (138), Expect = 7e-24 Identities = 147/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 131006 AGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGC 131065 ||||||| || | ||| ||||| | || | |||||||||||| || |||||||| || Sbjct 238776 AGCCACCACGGAGACGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCG 238717 Query 131066 TCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 | |||||| |||||| ||||||||||| ||| |||| |||||||||||||| |||| Sbjct 238716 AGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGAG 238657 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 |||| || || ||||| ||| || ||| | | || | || |||| ||||||| Sbjct 238656 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATCGTGTCGGACGACTCGA 238597 Query 131186 TGTCGACGGTAACGGTTTT 131204 |||| ||| | ||| || Sbjct 238596 CCTCGAGGGTGATGGTCTT 238578 Score = 116 bits (128), Expect = 3e-21 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| | || | |||||||||||| || ||||||||||| Sbjct 237778 CCACCACGGAGACGGAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAA 237719 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| || ||||||||||| |||||| Sbjct 237718 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGG 237659 Query 131128 ATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 237658 ATGCCCTCCTTGTC 237645 >seq13 Length=743395 Score = 109 bits (120), Expect = 5e-19 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| || || | |||||||||||| || |||||||| || Sbjct 146980 CCACCACGGAGACGAAGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 147039 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| | ||||||||| || || || Sbjct 147040 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGA 147099 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 ||||| || ||||| ||| || ||||| ||| Sbjct 147100 ATTCCCTCCTTGTCCTGGATCTTGGCCTTGACCTG 147134 >seq1 Length=1866479 Score = 102 bits (112), Expect = 8e-17 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 ||||||||||| || |||||||| || | ||||| |||||| ||||||||||| Sbjct 727051 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCAGCCGTCCTCGAGCTGCTTGCCG 726992 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| | |||||||||||||| |||||| || || ||||| ||| || |||| Sbjct 726991 GCGAAGATGAGACGCTGCTGGTCCGCAGGGATGCCCTCCTTGTCCTCGATCTTGGCCTTG 726932 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCG 131208 | | || | | |||| |||| ||| ||||||| | ||| || ||| Sbjct 726931 ACGTTGTCGATGCTGTCGGAGGACACGACCGCGACGGTGAGGGTCTTTCCG 726881 >seq25 Length=440178 Score = 100 bits (110), Expect = 3e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || || || || || | |||||||||||| || ||||||||||| | |||||| Sbjct 156509 CGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCA 156450 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| ||||||||||| ||| |||| | |||||||||||| || || ||||| || ||| Sbjct 156449 TCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATTCCCTCCTTG 156390 Query 131140 TCGGTGATTTTCTGCTTGAGCTG 131162 || ||| || ||||| ||| Sbjct 156389 TCCTGGATCTTGGCCTTGACCTG 156367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012080180480