Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq25 100 2e-16 seq13 91.5 1e-13 seq6 84.2 2e-11 >seq25 Length=440178 Score = 100 bits (110), Expect = 2e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| ||||| || || ||||| || || |||||||| Sbjct 156379 AAGATCCAGGACAAGGAGGGAATTCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGCAAG 156438 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | |||||| ||||||| | || ||||||||||| || || || || ||| | || Sbjct 156439 CAGCTCGAGGATGGCCGCACCCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTCCAC 156498 Query 22423 TTAGT 22427 || || Sbjct 156499 TTGGT 156503 >seq13 Length=743395 Score = 91.5 bits (100), Expect = 1e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| || ||||| || ||||| || || |||||||| Sbjct 147122 AAGATCCAGGACAAGGAGGGAATTCCCCCTGATCAGCAGCGTCTCATCTTCGCCGGCAAG 147063 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | ||||| ||||||| | || || |||||||| || || || || ||| | || Sbjct 147062 CAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTTCAC 147003 Query 22423 TTAGT 22427 || || Sbjct 147002 TTGGT 146998 >seq6 Length=1242253 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| || || ||||| || || ||| | || || |||||||| Sbjct 238632 AAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTTTGATCTTCGCCGGCAAG 238691 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| | ||||| ||||||| |||| || |||||||| || || || || ||| Sbjct 238692 CAGCTCGAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACC 238745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727375916930