Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq11 114 3e-20 seq29 113 9e-20 seq23 109 1e-18 seq1 105 1e-17 >seq11 Length=836129 Score = 114 bits (126), Expect = 3e-20 Identities = 69/73 (95%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||| Sbjct 581185 AGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTGGTCGTGGGTTCGAG 581244 Query 142563 CCCCACATCGGGC 142575 |||||||| |||| Sbjct 581245 CCCCACATTGGGC 581257 Score = 114 bits (126), Expect = 3e-20 Identities = 69/73 (95%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||| Sbjct 772626 AGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTGGTCGTGGGTTCGAG 772685 Query 142563 CCCCACATCGGGC 142575 |||||||| |||| Sbjct 772686 CCCCACATTGGGC 772698 Score = 114 bits (126), Expect = 3e-20 Identities = 69/73 (95%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||| Sbjct 794639 AGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTGGTCGTGGGTTCGAG 794698 Query 142563 CCCCACATCGGGC 142575 |||||||| |||| Sbjct 794699 CCCCACATTGGGC 794711 Score = 109 bits (120), Expect = 1e-18 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||| ||||| | ||||||||||||| ||||||||||||||||| Sbjct 562539 AGCCCGGTTAGCTCAGTCGGCAGAGCACCAGACTCTTAATCTGGTGGTCGTGGGTTCGAG 562480 Query 142563 CCCCACATCGGGC 142575 |||||||| |||| Sbjct 562479 CCCCACATTGGGC 562467 >seq29 Length=328867 Score = 113 bits (124), Expect = 9e-20 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||| Sbjct 27200 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTGGTCGTGGGTTCGAGC 27259 Query 142564 CCCACATCGGGC 142575 ||||||| |||| Sbjct 27260 CCCACATTGGGC 27271 >seq23 Length=479327 Score = 109 bits (120), Expect = 1e-18 Identities = 136/184 (74%), Gaps = 8/184 (4%) Strand=Plus/Plus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCA---G 280235 |||||||| || || || ||||| ||||| ||||| |||| || || ||||||| | Sbjct 17643 GGACCCAACGGAGCCGGAAAGTCGACCCTCATCAAGCTCCTCACCGGAGAGACCCTCCCG 17702 Query 280236 GCCACTG-AGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCA 280294 | | ||| | |||| |||||| |||||| | || | || |||||||| ||||| Sbjct 17703 GACTCTGGAAAGGTCGA----GAAGCACCCCAACCTTCGTGTCGCCTACGTCGCCCAGCA 17758 Query 280295 CGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCG 280354 ||| ||||||||||||||| | ||||| || | ||| | | || ||||| |||||||| Sbjct 17759 CGCCTTCCACCACATCGAGGAGCACCTCGAGAAGACCGCCATGCAGTACATCCAGTGGCG 17818 Query 280355 CTAT 280358 ||| Sbjct 17819 TTAT 17822 >seq1 Length=1866479 Score = 105 bits (116), Expect = 1e-17 Identities = 106/135 (79%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 279699 GGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCG- 279757 || || || || || || |||||||||||||| |||||| ||||||||||||| || || Sbjct 110958 GGATCCCTCTCCGGAGGATGGAAGATGAAGCTCGCCCTCGCTCGCGCCATTCT-CTTCGA 110900 Query 279758 TGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTG 279817 |||||| |||| || || |||||||| ||||||||| |||| | |||||| || || Sbjct 110899 GGCCGATATCCTCCTCCTCGATGAGCCCACCAACCACTTGGATGTTATCAACGTCGCGTG 110840 Query 279818 GCTAGTGTCCTACCT 279832 ||| | | |||||| Sbjct 110839 GCTCGAGAACTACCT 110825 Score = 100 bits (110), Expect = 6e-16 Identities = 129/176 (73%), Gaps = 3/176 (2%) Strand=Plus/Minus Query 280173 GTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACC 280232 ||| | |||||||| || | || ||||| ||||| |||| |||| || |||||| Sbjct 110415 GTCCTCGGACCCAACGGATCCGGAAAGTCGACCCTCGTCAAGCTCCTCGTCGGAGAGACC 110356 Query 280233 CAGGCCACTGAGGG--GTCCGTT-TGGAAGCATCCCAACATGCGGATGGCTTACGTCGCT 280289 |||||| |||| || | | |||||||| |||||| | || | |||||||| Sbjct 110355 GAGGCCAACAAGGGTGGTGAGGTGTGGAAGCACCCCAACCTTGTCATCGGATACGTCGCC 110296 Query 280290 CAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACAT 280345 |||||||| |||||||||||||| |||||||| ||| | || || ||| ||||| Sbjct 110295 CAGCACGCCTTCCACCACATCGACAACCACCTCGACCTCACCCCCCTCCAGTACAT 110240 Score = 89.7 bits (98), Expect = 1e-12 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 280712 CATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCAGCTCTGTGGCA 280771 ||| || |||||||| ||||| ||||||||||| | || ||| || || |||| Sbjct 109733 CATGCGTGGTCTTTCGGGAGGACAGAAGGTCAAGGTCGTTCTCGCTGCCGCCACCTGGCG 109674 Query 280772 ACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGG 280831 | || ||||| || | ||||||||||| |||||||| || ||||||||| || | Sbjct 109673 CCGGCCGCACGTCGTCATCCTCGACGAGCCCACCAACTACCTCGACCGCGAGTCGCTCGC 109614 Query 280832 CGCTCTGAGTGCTGCTCTGGACACATTTGGCGGCGGCGTCGTAGTCATTTCTCACAGCAC 280891 ||| || | ||||| || | ||||| | || || || | ||||| | |||| | Sbjct 109613 CGCCCTTATCGCTGCGCTCAAGACATTCGAGGGAGGAGTGCTGGTCATCACCCACAACCG 109554 Query 280892 AGAATTTGTCAAGTCTGTGTGCTCCGAGATGTGG 280925 || || | |||| | ||||| ||| ||||| Sbjct 109553 CGAGTTCTCCGAGTCGATTTGCTCGGAGGTGTGG 109520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835193362602