Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq23 116 7e-21 seq11 104 4e-17 seq29 98.7 2e-15 seq1 89.7 9e-13 >seq23 Length=479327 Score = 116 bits (128), Expect = 7e-21 Identities = 136/181 (75%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 224977 ATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAA 225036 ||| ||||||||||||||||| ||| |||| | || ||||| | ||| || |||||||| Sbjct 17822 ATAACGCCACTGGATGTACTGCATGGCGGTCTTCTCGAGGTGCTCCTCGATGTGGTGGAA 17763 Query 225037 AGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGT 225096 || |||||||| ||||| || | || | |||||| |||||| || || |||| Sbjct 17762 GGCGTGCTGGGCGACGTAGGCGACACGAAGGTTGGGGTGCTTCTCGAC-CTTTCCAGAGT 17704 Query 225097 -CGGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGC 225155 ||| | | ||| |||||||||| ||||||||| || | ||| || || || ||||| | Sbjct 17703 CCGGGAGGGTCTCTCCGGTGAGGAGCTTGATGAGGGTCGACTTTCCGGCTCCGTTGGGTC 17644 Query 225156 C 225156 | Sbjct 17643 C 17643 >seq11 Length=836129 Score = 104 bits (114), Expect = 4e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||||||||||||||||||||||| | || ||||||| || |||||||||||||||||| Sbjct 562538 GCCCGGTTAGCTCAGTCGGCAGAGCACCAGACTCTTAATCTGGTGGTCGTGGGTTCGAGC 562479 Query 84516 CCCACATCGGGC 84527 ||||||| |||| Sbjct 562478 CCCACATTGGGC 562467 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||||||||||||||||| ||||| | || ||||||| || |||||||||||||||||| Sbjct 581186 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTGGTCGTGGGTTCGAGC 581245 Query 84516 CCCACATCGGGC 84527 ||||||| |||| Sbjct 581246 CCCACATTGGGC 581257 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||||||||||||||||| ||||| | || ||||||| || |||||||||||||||||| Sbjct 772627 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTGGTCGTGGGTTCGAGC 772686 Query 84516 CCCACATCGGGC 84527 ||||||| |||| Sbjct 772687 CCCACATTGGGC 772698 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||||||||||||||||| ||||| | || ||||||| || |||||||||||||||||| Sbjct 794640 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTGGTCGTGGGTTCGAGC 794699 Query 84516 CCCACATCGGGC 84527 ||||||| |||| Sbjct 794700 CCCACATTGGGC 794711 >seq29 Length=328867 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||||||||||||||||| ||||| | || ||||||| || |||||||||||||||||| Sbjct 27200 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTGGTCGTGGGTTCGAGC 27259 Query 84516 CCCACATCGGGC 84527 ||||||| |||| Sbjct 27260 CCCACATTGGGC 27271 >seq1 Length=1866479 Score = 89.7 bits (98), Expect = 9e-13 Identities = 123/170 (72%), Gaps = 3/170 (2%) Strand=Plus/Plus Query 224990 ATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCATGCTGGGCT 225049 ||||||||| |||||| | ||| |||||||| || || |||||||| || |||||||| Sbjct 110240 ATGTACTGGAGGGGGGTGAGGTCGAGGTGGTTGTCGATGTGGTGGAAGGCGTGCTGGGCG 110299 Query 225050 ACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGC--CCCGAGTCGG-TTGTGCC 225106 ||||| | ||| | |||||| ||||||||||| | ||| || || | | | Sbjct 110300 ACGTATCCGATGACAAGGTTGGGGTGCTTCCACACCTCACCACCCTTGTTGGCCTCGGTC 110359 Query 225107 TCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCC 225156 || ||| ||||| ||||| ||| || | ||| || | || ||||| || Sbjct 110360 TCTCCGACGAGGAGCTTGACGAGGGTCGACTTTCCGGATCCGTTGGGTCC 110409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921620994525840