Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq21 304 2e-77 seq20 187 5e-42 seq11 111 3e-19 >seq21 Length=517387 Score = 304 bits (336), Expect = 2e-77 Identities = 557/811 (69%), Gaps = 14/811 (2%) Strand=Plus/Plus Query 244792 GTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGAC 244851 |||| |||||||||||||||||||||||| |||||||||| ||| || |||| | Sbjct 16414 GTTGGCGGCGTCCTTGTAGAGCATGAAGGGGTTACCGGTCTCGACCTGAGCCTCGAGAAT 16473 Query 244852 GCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCG 244911 | || ||| || | || || ||| | || ||||| |||||| Sbjct 16474 GGCGTACCACAGCTTTTGCGCGGGGATGGTCTTCTTGGCGCGACCCTCCTTCTCGTACTT 16533 Query 244912 GGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGG 244971 | || | || |||| ||||||| ||| | ||||||| || ||||| | || || Sbjct 16534 GTTGAAGAGAGCCTTGAACTCGTCGCCGTACACCTCGTGGAGTCCGGGAGCCTCGGCGGG 16593 Query 244972 GCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCA 245031 ||| | ||| ||| |||||| | |||| ||| | || ||||||||||||||| ||||| Sbjct 16594 GCAGAAGAGGGGCCAGTCGCCGGCCTCCTCGACACGCTCCATGAAGAGGTCGGGAATCCA 16653 Query 245032 GAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTC 245091 |||||| |||||| ||||||| | ||| ||| ||| |||||| | || || Sbjct 16654 GAGGGCGAAGAAGAGATCCCTGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGAAGGTC 16713 Query 245092 CAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCG 245151 | || || |||| |||| ||||||| || || | ||||| |||| ||| ||||| || Sbjct 16714 GAGGAACTCGAAGATGTCGGCGTGCCATGGTTCGAGGTAGATGGCGAAGGCTCCGGGGCG 16773 Query 245152 CTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAG 245207 |||||| |||||||||| || | | ||||| |||| ||| || || ||| Sbjct 16774 CTTGTTTCCTCCCTGGT----CAACGTAGCGAGCCGTGTTGTTGTAGACACGGAGCATAG 16829 Query 245208 GCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGT 245267 | | |||||||| |||| ||||||||| || |||||| | ||| | | | || || Sbjct 16830 GGATGATGCCGTTCGAGTAGCCGTTGGTTCCGGCGATGTACGAGCCAGTCGCGCGGATGT 16889 Query 245268 TGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGG 245327 || |||| | || | ||| ||||| ||||||||||||||||||| |||||| | Sbjct 16890 TGTGGATGCTGAGTCCGATTCCTCCGGCCGTCTTGGAGATGAGGGCGCAGGTCTTGAGCG 16949 Query 245328 TGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCT 245387 |||| || ||||| || ||| ||||||| ||| || ||||||||||| |||| Sbjct 16950 TGTCGTAGATACCCTCGATCGAGTCGTCCTTCATGGTGACGAGGAAGCAGGAGGAGAGCT 17009 Query 245388 GGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCG 245447 |||| | || | | | |||||| || || || ||||||||| |||||||| || Sbjct 17010 GGGGGTGAGGAGTTCCGGCGTTGAAGAGGGTCGGCGAGGCGTGGGTGAAGTAGCGCTCCG 17069 Query 245448 AGAGGAACCCGTACGTCTGGAGCA-GAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCG 245506 | | || ||||| |||||| | | || || |||| ||||||||| | ||| Sbjct 17070 ACATGAGGTTGTACGACTGGAGAACGCGC-TCAATGTCCGAGCCGTGGATACCGACAGCG 17128 Query 245507 CACCTCATGAGGGTGTGCTGGGGCGTCTCGATGGGTCCCTCGGGTCCCT--TGAGCATGT 245564 | |||||| ||||||| || |||| | | || | ||| | || | || Sbjct 17129 ACACGCATGAGCATGTGCTGAGGTCGCTCG--GCGACCTTGCCGTCGATGCGAAGGAGGT 17186 Query 245565 AGGAGCGCTCGAGCGTCTTGAACCCAAAGTA 245595 | ||||||||||| |||||||| || ||||| Sbjct 17187 AAGAGCGCTCGAGGGTCTTGAAGCCGAAGTA 17217 Score = 109 bits (120), Expect = 1e-18 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 244391 TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCG 244450 |||| |||||||| ||||||||||||||||||| ||| | | ||| |||| | Sbjct 15842 TCGATGGCGGCGTGGTAGATGGTCTCGAAGATCTGGAGGTTGAGCTTGCGAGCCTCGGGC 15901 Query 244451 CAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCG 244510 || |||||| | || | ||||||| ||||||| ||||||||||| ||||||||| Sbjct 15902 GAGTCGAAGGGCAGGCGGAGGGCCATGAAGGCGTCGGCGAGTCCCTGCACTCCGATGCCG 15961 Query 244511 ATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCG 244570 ||||| | ||| || ||| ||| | ||| || ||||| || ||||| ||||| Sbjct 15962 ATGGGGCGGTGACGGAGGTTCGAGTTCTCGGCCTCCTTGACGGGATAGTAGTTGACGTCG 16021 Query 244571 ATCACCTTGTTGAGGTTG 244588 || | |||||||||| Sbjct 16022 ATGATGCGGTTGAGGTTG 16039 >seq20 Length=589438 Score = 187 bits (206), Expect = 5e-42 Identities = 216/285 (76%), Gaps = 7/285 (2%) Strand=Plus/Minus Query 42748 CCTTCGCCTCCATCTTCTGGCTCAAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCG 42806 |||||||||||||||||||||||||| || || || |||||||||||||||||||| Sbjct 425250 CCTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTC-ATGCCCGGACTCACCTTCTCC 425192 Query 42807 AACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCG 42866 ||||| |||||| | ||||| || || || | ||||||||||||||| ||||||| Sbjct 425191 AACGAGCTCATCTCGCGCGACGAAGGCCTTCACACCGACTTTGCCTGCCTCATGTTCTCT 425132 Query 42867 AGCCACCTCAGGCACAAGCCCTCGAAG-GAGCGGGTCCGGGCCATCATCACGGAGGCCGT 42925 || ||| || |||||| || ||| | |||||| |||||||| Sbjct 425131 ---CATCTCGAGCGTC-GCCCTCACCCCGACACCGTCGAGATGATCATCCGCGAGGCCGT 425076 Query 42926 GGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCA 42985 ||||| ||||||||||||||||| || | || ||||| ||||| |||| |||||| Sbjct 425075 CGAGATTGAGAAGGAGTTCCTCACCGAGGCCCTCCCCGTCTCCCTCATCGGAATGAACGC 425016 Query 42986 CGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT 43030 | |||||||||| |||||||| ||| ||||||||||| ||||| Sbjct 425015 CACCCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTCCT 424971 >seq11 Length=836129 Score = 111 bits (122), Expect = 3e-19 Identities = 162/224 (72%), Gaps = 9/224 (4%) Strand=Plus/Plus Query 42744 GGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTT 42802 ||| |||||||||||||||| |||||||| || ||| || |||||||| ||| ||| Sbjct 271954 GGCTCCTTCGCCTCCATCTTTTGGCTCAAAAAGCGAGGCCTC-ATGCCCGGTCTCTGCTT 272012 Query 42803 CTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTT 42862 ||| |||||||||||| ||||||| |||||||| | || || || |||||||| || Sbjct 272013 CTCCAACGAACTCATCTCACGGGACGAAGGGCTGCACACCGATTTCGCTTGCCTCCTCTT 272072 Query 42863 CTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCG--GGTCCGGGCCATCATCACGGAG 42920 | | ||| | | || || || || |||| ||| |||||| | | ||| Sbjct 272073 C---ACCCATTTGAACCATCGACCATC--AGAAGCGACTGTCTCTGCCATCGTGAGGGAA 272127 Query 42921 GCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGT 42964 || || ||||| |||||||||||| | | || ||||||| || Sbjct 272128 GCAGTAGAGATTGAGAAGGAGTTCTTGAGCGAGGCGCTGCCGGT 272171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944337759882720