Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq25 96.9 3e-15 seq6 96.9 3e-15 seq13 93.3 4e-14 seq1 82.4 8e-11 >seq25 Length=440178 Score = 96.9 bits (106), Expect = 3e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || || ||||||||||| | | |||||| | || || |||||||||||| Sbjct 156491 GTCGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 156432 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359 || | ||||| |||||||||||||| |||||||| || || || || || || Sbjct 156431 GCGAAGATGAGACGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGATCTT 156379 >seq6 Length=1242253 Score = 96.9 bits (106), Expect = 3e-15 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || |||| ||||| || || || |||||||| || | || |||||| |||| Sbjct 238759 AGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCC 238700 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||||||||| | || | ||||||||||||||||| || || || || || Sbjct 238699 TCGAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 238640 Query 64352 TGTATTTT 64359 || || || Sbjct 238639 TGGATCTT 238632 Score = 91.5 bits (100), Expect = 1e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || || | ||||| || || || ||||||||||| | | |||||| |||| Sbjct 237763 AGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCGTCC 237704 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||||||||| | || | ||||||||||||||||| || || || || || Sbjct 237703 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 237644 Query 64352 TGTATTTT 64359 || || || Sbjct 237643 TGGATCTT 237636 >seq13 Length=743395 Score = 93.3 bits (102), Expect = 4e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| | |||| ||||| || || || |||||||| || | | |||||| |||| Sbjct 146994 AAGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTC 147053 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || |||||||||||||| | ||||| |||||||| || || |||||||| || || || Sbjct 147054 CTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGAATTCCCTCCTTGTC 147113 Query 64351 TTGTATTTT 64359 || || || Sbjct 147114 CTGGATCTT 147122 >seq1 Length=1866479 Score = 82.4 bits (90), Expect = 8e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297 || || | |||||| || || || |||||||| || | || ||||| |||| || ||| Sbjct 727060 AGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCAGCCGTCCTCGAGC 727001 Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||||||||||| | ||||| ||||||||||| | ||| || || || || || Sbjct 727000 TGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGCAGGGATGCCCTCCTTGTC 726948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644038041680