Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq20 118 1e-21 seq6 86.0 6e-12 >seq20 Length=589438 Score = 118 bits (130), Expect = 1e-21 Identities = 213/307 (69%), Gaps = 17/307 (6%) Strand=Plus/Minus Query 47223 ATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAAC 47282 |||||||| ||||| || ||||||||| |||||| | ||||||||||| |||||| || Sbjct 425212 ATGCCCGGACTCACCTTCTCCAACGAGCTCATCTCGCGCGACGAAGGCCTTCACACCGAC 425153 Query 47283 TTTGCCTGTCTC---TACTA-CAACACTAGAGTCGATCAAAAGTTGGACGTGCCCACCGT 47338 |||||||| ||| | || || | | || |||| | | | |||||| Sbjct 425152 TTTGCCTGCCTCATGTTCTCTCATCTCGAGCGTCGCCCTCACCCCGA-------CACCGT 425100 Query 47339 CAGCGACATGTT--TGC-CGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCT 47395 | || ||| | | | ||| ||||||| ||||||| |||||| || ||||||| || Sbjct 425099 C---GAGATGATCATCCGCGAGGCCGTCGAGATTGAGAAGGAGTTCCTCACCGAGGCCCT 425043 Query 47396 GCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGC 47455 |||| || | | ||||||||||| | ||| | |||||||||| || ||||| Sbjct 425042 CCCCGTCTCCCTCATCGGAATGAACGCCACCCTCATGTGCCAGTACATCGAGTTCGTCGC 424983 Query 47456 CGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGA 47515 ||||||||| || || || | |||||| ||||| | |||||| || ||||| Sbjct 424982 CGACCGCCTCCTTGTCTCCCTCGGCAACCCCAAGGTTTACAAGGTCGAGAACCCCTTCGA 424923 Query 47516 GTTTATG 47522 || ||| Sbjct 424922 CTTCATG 424916 >seq6 Length=1242253 Score = 86.0 bits (94), Expect = 6e-12 Identities = 116/159 (73%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || | ||||| || || ||||| || || Sbjct 238744 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 238685 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||| |||||||| |||||||| ||||||||||||||| ||| || ||| Sbjct 238684 GCGAAGATCAAACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTA 238625 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGT 127074 | |||| |||| ||||| | |||||| |||| ||| Sbjct 238624 ACGTTG-TCGATCGTGTCGGACGACTCGACCTCGAGGGT 238587 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | || | ||| | || | || ||||| || || || |||||||| Sbjct 237779 TCCACCACGGAGACGGAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGA 237720 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | ||||| || || ||||| || || ||| ||||||| |||||||| |||||||| Sbjct 237719 AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGG 237660 Query 127006 TATGCCCTCCTTGTCCGTGATTTT 127029 ||||||||||||||| ||| || Sbjct 237659 GATGCCCTCCTTGTCCTGGATCTT 237636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500074861280