Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq25 109 1e-18 seq1 102 2e-16 seq6 98.7 2e-15 seq13 96.9 8e-15 >seq25 Length=440178 Score = 109 bits (120), Expect = 1e-18 Identities = 101/128 (79%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | |||||| ||||||||||| |||| |||||| || | | || | ||||| Sbjct 156506 AGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCC 156447 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||||||||||||||||||||| || |||||| || ||| Sbjct 156446 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCC 156387 Query 199538 TGAATCTT 199545 || ||||| Sbjct 156386 TGGATCTT 156379 >seq1 Length=1866479 Score = 102 bits (112), Expect = 2e-16 Identities = 79/94 (84%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483 |||||||| ||||||||||| |||| ||||||||| | | || | || || || ||| Sbjct 727060 AGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCAGCCGTCCTCGAGC 727001 Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCG 199517 ||||| |||||||||||||||||||||||||||| Sbjct 727000 TGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCG 726967 >seq6 Length=1242253 Score = 98.7 bits (108), Expect = 2e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || ||||||||||| |||| ||||||||| | | || | || || Sbjct 238759 AGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCC 238700 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||| | |||||||||||| ||| || || || ||| Sbjct 238699 TCGAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 238640 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| ||||| | | || || || | ||||| ||| Sbjct 238639 TGGATCTTGGCCTTAACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 238580 Query 199598 TT 199599 || Sbjct 238579 TT 238578 Score = 87.8 bits (96), Expect = 4e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || |||||||| ||||||||||| |||| |||||| || | | || | || || Sbjct 237763 AGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCGTCC 237704 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||| | ||||||||||| ||| || || || ||| Sbjct 237703 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 237644 Query 199538 TGAATCTT 199545 || ||||| Sbjct 237643 TGGATCTT 237636 >seq13 Length=743395 Score = 96.9 bits (106), Expect = 8e-15 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || ||||||||||| |||| ||||||||| | | || | || || Sbjct 146995 AGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 147054 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||||||||||||||| || || |||||| || ||| Sbjct 147055 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGAATTCCCTCCTTGTCC 147114 Query 199538 TGAATCTT 199545 || ||||| Sbjct 147115 TGGATCTT 147122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178919757198174