Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq6 129 7e-25 seq1 105 8e-18 seq25 96.9 4e-15 seq13 96.9 4e-15 >seq6 Length=1242253 Score = 129 bits (142), Expect = 7e-25 Identities = 128/163 (79%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || ||||| |||| |||||||||||||||||||| Sbjct 238739 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 238680 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||||||||||| || | || |||||||||| |||||| ||| | ||| Sbjct 238679 GATCAAACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTT-AACGT 238621 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 | | | ||||||| ||| || || || | |||||||| || Sbjct 238620 TGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTT 238578 Score = 118 bits (130), Expect = 1e-21 Identities = 91/108 (84%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || || ||||| |||| |||||||||||||||||||| Sbjct 237743 CTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 237684 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTT 46509 ||||||||||||||||||| || | || |||||||||| |||||| Sbjct 237683 GATCAAGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTT 237636 >seq1 Length=1866479 Score = 105 bits (116), Expect = 8e-18 Identities = 93/116 (80%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || |||| |||| |||||||||||||||||||| Sbjct 727046 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCAGCCGTCCTCGAGCTGCTTGCCGGCGAA 726987 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA 46517 || | ||||||||||| || || | || |||||||||| |||||| ||||| Sbjct 726986 GATGAGACGCTGCTGGTCCGCAGGGATGCCCTCCTTGTCCTCGATCTTGGCCTTGA 726931 >seq25 Length=440178 Score = 96.9 bits (106), Expect = 4e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || || ||||| | || |||||||||||||||||||| Sbjct 156486 CTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 156427 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA 46517 || | ||||||||||||| || | | |||||||||| |||||| ||||| Sbjct 156426 GATGAGACGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGA 156371 >seq13 Length=743395 Score = 96.9 bits (106), Expect = 4e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || ||||| |||| |||||||||||||||||||| Sbjct 147015 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 147074 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA 46517 || | |||||||| || | || | | |||||||||| |||||| ||||| Sbjct 147075 GATGAGACGCTGCTGATCAGGGGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGA 147130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237538011440