Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq20 149 6e-31 seq6 114 1e-20 seq1 114 1e-20 seq13 113 5e-20 seq25 105 7e-18 seq11 96.9 3e-15 >seq20 Length=589438 Score = 149 bits (164), Expect = 6e-31 Identities = 167/223 (75%), Gaps = 3/223 (1%) Strand=Plus/Plus Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTC 133277 ||| || || ||||| ||||| || |||||| | |||||| || | ||| ||||| Sbjct 425666 GATCTGGAATCCGTAGAAGCAACGAGCCTCGGCGCACTGCACCTCGGACGAGAAGCGCTC 425725 Query 133278 GACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGAT 133337 || ||| || ||||||||||| || || |||||||| ||||| || ||||||| ||| Sbjct 425726 GAGCAGGTTCTCGTTGACGATACCATCCGAAGCGGCGAAGAAGGCGAGGACGTGCTGGAT 425785 Query 133338 GAAATGGCGCTCGTTGTCGTT---CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTC 133394 || | |||||||| || || | | ||||||||| || |||||||||| ||||| Sbjct 425786 AAAGTAGCGCTCGTCCTCCTTGAGCTTGTTGTCCCAGTCGTGCATGTCCTTGGAAAGGTC 425845 Query 133395 CACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTAC 133437 || ||| ||| ||||||| || || ||||| || || |||||| Sbjct 425846 CATCTCTTCGGCGGTCCAGAAGGAGGCCTCAGCCTTCTTGTAC 425888 Score = 105 bits (116), Expect = 7e-18 Identities = 230/338 (68%), Gaps = 10/338 (3%) Strand=Plus/Plus Query 132666 CATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAG 132722 ||| || || |||||||| | ||||| ||||| |||||| || ||| || Sbjct 424916 CATGAAGTCGAAGGGGTTCTCGACCTTGTAAACCTTGGGGTTGCCGA---GGGAGACAAG 424972 Query 132723 CAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCA 132781 || | |||||| |||||||||||||| || ||||| | | || || | ||| | | Sbjct 424973 GAGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAGGGTGGCG-TTCATTCCGATGA 425031 Query 132782 GACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGA 132841 | || || || || |||||||| || | ||| || |||| || ||| || || Sbjct 425032 GGGAGACGGGGAGGGCCTCGGTGAGGAACTCCTTCTCAATCTCGACGGCCTCGCGGATGA 425091 Query 132842 TTTCCCTAACGCGCGCCGCGCTC-GGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCA 132900 | | ||| | | || | | || || || | | ||| |||||| | ||| ||| Sbjct 425092 TCATCTCGACG-GTGTCGGGGTGAGGGCGACGCTCGAGATGAGAGAACATGAGGCAGGCA 425150 Query 132901 AAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGC 132960 |||||| || | ||| ||||| | || ||||| |||||| ||| || | |||||| Sbjct 425151 AAGTCGGTGTGAAGGCCTTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGTCCGGGC 425210 Query 132961 ATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAA 132998 ||||||||||| || |||||||| || |||| |||||| Sbjct 425211 ATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCGAA 425248 >seq6 Length=1242253 Score = 114 bits (126), Expect = 1e-20 Identities = 139/187 (74%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 38274 AAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGAAAAAAT 38332 || ||||||||| |||| |||||| | |||||| | | |||| |||| | || || Sbjct 238578 AAGACCATCACCCTCGAGGTCGAGTCGTCCGACACGATCGACAACG-TTAAGGCCAAGAT 238636 Query 38333 CCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCT 38392 || ||||| ||||| || || ||||||| ||||| | || | ||| ||||| ||||| Sbjct 238637 CCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTTTGATCTTCGCCGGCAAGCAGCT 238696 Query 38393 GGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGT 38452 || |||| ||||||||| |||||||||||||| ||||| |||| || || | || Sbjct 238697 CGAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGT 238756 Query 38453 GCTGCGT 38459 ||| ||| Sbjct 238757 GCTCCGT 238763 Score = 86.0 bits (94), Expect = 6e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 38320 TTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACG 38379 |||| | || |||| ||||| ||||| || || ||||||| ||||| | || | || Sbjct 237628 TTAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCTTGATCTTCG 237687 Query 38380 CGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGA 38439 | ||||| ||||| || |||| |||||||| || ||||||||||| ||||| ||| Sbjct 237688 CCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGATTACAACATCCAGAAGGAGTCGA 237747 Query 38440 CGCTGCATTTGGTGCTGCGT 38459 | || || | ||||| ||| Sbjct 237748 CCCTCCACCTCGTGCTCCGT 237767 >seq1 Length=1866479 Score = 114 bits (126), Expect = 1e-20 Identities = 133/177 (75%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 38271 GGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGAAAA 38329 || || ||| ||||||||| |||| | || |||||||| | | |||| | || | || Sbjct 726882 GGAAAGACCCTCACCGTCGCGGTCGTGTCCTCCGACAGCATCGACAACG-TCAAGGCCAA 726940 Query 38330 AATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACA 38389 ||| ||||| ||||| || || || ||||| ||||| ||||| | ||| ||||| || Sbjct 726941 GATCGAGGACAAGGAGGGCATCCCTGCGGACCAGCAGCGTCTCATCTTCGCCGGCAAGCA 727000 Query 38390 GCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 ||| || |||| |||||||| |||||||||||||| ||||| ||||||| || Sbjct 727001 GCTCGAGGACGGCTGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACGCTCCA 727057 >seq13 Length=743395 Score = 113 bits (124), Expect = 5e-20 Identities = 104/132 (79%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || |||| ||||| |||||||||||| | || || ||||| ||||| | ||| ||||| Sbjct 147122 AAGATCCAGGACAAGGAGGGAATTCCCCCTGATCAGCAGCGTCTCATCTTCGCCGGCAAG 147063 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447 ||||| || |||| |||||||| |||||||||||||| ||||| |||| || || Sbjct 147062 CAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTTCAC 147003 Query 38448 TTGGTGCTGCGT 38459 |||||||| ||| Sbjct 147002 TTGGTGCTTCGT 146991 >seq25 Length=440178 Score = 105 bits (116), Expect = 7e-18 Identities = 102/131 (78%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || |||| ||||| |||||||||||| ||||||| ||||| ||||| | ||| ||||| Sbjct 156379 AAGATCCAGGACAAGGAGGGAATTCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGCAAG 156438 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447 ||||| || || | |||||||| || ||||||||||| ||||| |||| || || Sbjct 156439 CAGCTCGAGGATGGCCGCACCCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTCCAC 156498 Query 38448 TTGGTGCTGCG 38458 ||||| || || Sbjct 156499 TTGGTCCTCCG 156509 >seq11 Length=836129 Score = 96.9 bits (106), Expect = 3e-15 Identities = 159/226 (70%), Gaps = 5/226 (2%) Strand=Plus/Minus Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCT 133276 ||| || || || || ||||||| ||||||| | |||||| || |||| ||| | || Sbjct 271513 GATCTGGAACCCATAGAAGCACCTCGCCTCGGCACACTGCACCTCG-GAGCTGAACCTCT 271455 Query 133277 CGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGA 133336 | |||||||| || ||||||||||| || || | ||| ||||| || || || | Sbjct 271454 CCACCAGATTCTCATTGACGATGCCATCCGACGCCGAGAAGAAGGCGAGGACATGGGAAA 271395 Query 133337 TGAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGT 133393 ||| | |||||||| |||||| | || | ||||||| ||| | ||||| Sbjct 271394 CGAAGTAGCGCTCGTCGTCGTTGAGCCGAGTGTTCCAGTCGACTAGGTCGCCGCCCAGGT 271335 Query 133394 CCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | | ||| ||| | |||||||| || || | ||||| |||||||| Sbjct 271334 CGATCTCTTCGGCTGTCCAAAAGGAGGCTTGCGCTTTCTTGTACAT 271289 Score = 91.5 bits (100), Expect = 1e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 132876 CAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAG 132935 |||||| |||| | | |||||| || ||| |||| || ||||||| || ||||| Sbjct 272082 CAAATGGGTGAAGAGGAGGCAAGCGAAATCGGTGTGCAGCCCTTCGTCCCGTGAGATGAG 272023 Query 132936 TTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGC 132995 ||||||| ||| | |||||||||||||| || |||||||||||||| |||| ||| Sbjct 272022 TTCGTTGGAGAAGCAGAGACCGGGCATGAGGCCTCGCTTTTTGAGCCAAAAGATGGAGGC 271963 Query 132996 GAA 132998 ||| Sbjct 271962 GAA 271960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172037236480