Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq21 152 1e-31 seq11 145 1e-29 seq20 140 6e-28 >seq21 Length=517387 Score = 152 bits (168), Expect = 1e-31 Identities = 283/415 (68%), Gaps = 3/415 (1%) Strand=Plus/Plus Query 213713 CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACA 213772 |||||||| | | |||| | ||||| |||| ||| | ||| || ||||| ||| Sbjct 16525 CTCGTACTTGTTGAAGAGAGCCTTGAACTCGTCGCCGTACACCTCGTGGAGTCCGGGAGC 16584 Query 213773 GGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTC 213832 ||||| || | |||| |||||| ||| | || ||| | || |||||| ||||| Sbjct 16585 CTCGGCGGGGCAGAAGAGGGGCCAGTCGCCGGCCTCCTCGACACGCTCCATGAAGAGGTC 16644 Query 213833 CGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTT 213892 || | ||| || ||| ||| || ||||||| | ||| ||| || ||| || Sbjct 16645 GGGAATCCAGAGGGCGAAGAAGAGATCCCTGGCGCGAACCTCCTCCTTGCCGTGGTTCTT 16704 Query 213893 GCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGC 213952 ||| || || || || || |||||||| |||||||| || || | ||||||||| ||||| Sbjct 16705 GCGAAGGTCGAGGAACTCGAAGATGTCGGCGTGCCATGGTTCGAGGTAGATGGCGAAGGC 16764 Query 213953 GCCCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAG 214009 || || | |||| || |||||||| || | ||| ||||| ||| || || Sbjct 16765 TCCGGGGCGCTTGTTTCCTCCCTGGTCAACGTAGCGAGCCGTGTTGTTGTAGACACGGAG 16824 Query 214010 GACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCT 214069 | || | | ||||| || | ||||||||||| || || |||||||| | || | Sbjct 16825 CATAGGGATGATGCCGTTCGAGTAGCCGTTGGTTCCGGCGATGTACGAGCCAGTCGCGCG 16884 Query 214070 CAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAG 214124 | |||| ||| ||| || || || ||||| ||||||||| | ||||||| Sbjct 16885 GATGTTGTGGATGCTGAGTCCGATTCCTCCGGCCGTCTTGGAGATGAGGGCGCAG 16939 Score = 87.8 bits (96), Expect = 3e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 213192 GCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTG 213251 |||| ||||| |||| || | ||| |||| ||||||||| || || |||| |||| Sbjct 15824 GCCATATCGCACGACGACTCGATGGCGGCGTGGTAGATGGTCTCGAAGATCTGGAGGTTG 15883 Query 213252 AGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGC 213311 ||||| ||||| || || |||||||| | | ||| | || || || Sbjct 15884 AGCTTGCGAGCCTCGGGCGAGTCGAAGGGCAGGCGGAGGGCCATGAAGGCGTCGGCGAGT 15943 Query 213312 CCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAG 213371 ||||| || |||||||||||||| | ||| | ||||| || || | ||||| | | Sbjct 15944 CCCTGCACTCCGATGCCGATGGGGCGGTGACGGAGGTTCGAGTTCTCGGCCTCCTTGACG 16003 Query 213372 GGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTG 213407 || || ||||| ||||||||| |||||||||| Sbjct 16004 GGATAGTAGTTGACGTCGATGATGCGGTTGAGGTTG 16039 >seq11 Length=836129 Score = 145 bits (160), Expect = 1e-29 Identities = 175/235 (74%), Gaps = 5/235 (2%) Strand=Plus/Minus Query 48454 GATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACAC-CTGCACTTCTGTGGAGAATCTCT 48512 |||||||||||| |||||| ||| ||||| ||| |||||| || | | ||| |||| Sbjct 271513 GATCTGGAACCCATAGAAGCACCTCGCCTCGG-CACACTGCACCTCGGAGCTGAACCTCT 271455 Query 48513 CCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAA 48572 ||| ||||||||||||||| || ||||| || || | |||||||| |||||||| || Sbjct 271454 CCACCAGATTCTCATTGACGATGCCATCCGACGCCGAGAAGAAGGCGAGGACATGGGAAA 271395 Query 48573 GGAAATGGCGCTCGTTGTGGGTGA---GAGCATTCCAGCCCTGTACGTCTTTGCCCAGGT 48629 ||| | |||||||| || | ||| ||| |||||| | || ||| |||||||| Sbjct 271394 CGAAGTAGCGCTCGTCGTCGTTGAGCCGAGTGTTCCAGTCGACTAGGTCGCCGCCCAGGT 271335 Query 48630 CCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684 | | ||||| | ||||| ||||| || | ||||| |||||||| |||| || Sbjct 271334 CGATCTCTTCGGCTGTCCAAAAGGAGGCTTGCGCTTTCTTGTACATCGCCCAGAT 271280 Score = 96.9 bits (106), Expect = 6e-15 Identities = 92/118 (78%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182 |||| | ||| || || || |||||| ||||||||||| |||||| ||||||||| Sbjct 272071 AGAGGAGGCAAGCGAAATCGGTGTGCAGCCCTTCGTCCCGTGAGATGAGTTCGTTGGAGA 272012 Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCC 48240 |||||||||| ||||||| || | || ||||||||| || || | ||||| ||||| Sbjct 272011 AGCAGAGACCGGGCATGAGGCCTCGCTTTTTGAGCCAAAAGATGGAGGCGAAGGAGCC 271954 >seq20 Length=589438 Score = 140 bits (154), Expect = 6e-28 Identities = 210/295 (71%), Gaps = 19/295 (6%) Strand=Plus/Plus Query 47954 AGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013 || ||| | || |||||| |||||||||| | ||||||||||| |||||| || ||| Sbjct 424971 AGGAGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAGGGTGGCGTTCATTCCGATG 425030 Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073 ||||| ||||| | |||| ||||| ||||||||||| |||| ||||| || | | Sbjct 425031 AGGGAGACGGGGAGGGCCTCGGTGAGGAACTCCTTCTCAATCTCGACGGCCTCGCGGATG 425090 Query 48074 ATCTGCTTAACG----CGGGACTCTGAGGGTTTGTTGCGC-AGGTGCTTGGCATAGAGCA 48128 ||| || ||| |||| |||||| | || | || || | ||| || Sbjct 425091 ATCATCTCGACGGTGTCGGG---GTGAGGG--CGACGCTCGAGATG------AGAGAACA 425139 Query 48129 T---GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGC 48185 | |||||||||||| |||| | ||||||||| || ||||||| ||||||||||| Sbjct 425140 TGAGGCAGGCAAAGTCGGTGTGAAGGCCTTCGTCGCGCGAGATGAGCTCGTTGGAGAAGG 425199 Query 48186 AGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCC 48240 ||| || ||||||| || | || ||||||||||| || | ||||| || || Sbjct 425200 TGAGTCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGATCC 425254 Score = 100 bits (110), Expect = 5e-16 Identities = 165/235 (70%), Gaps = 5/235 (2%) Strand=Plus/Plus Query 48454 GATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTC 48513 ||||||||| ||||||||| | ||||| |||||| || | ||||| | ||| Sbjct 425666 GATCTGGAATCCGTAGAAGCAACGAGCCTCGGCGCACTGCACCTCGGACGAGAAGCGCTC 425725 Query 48514 CAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAG 48573 ||||| ||||| ||||| || ||||| ||||| || |||||||| ||||| || | | Sbjct 425726 GAGCAGGTTCTCGTTGACGATACCATCCGAAGCGGCGAAGAAGGCGAGGACGTGCTGGAT 425785 Query 48574 GAAATGGCGCTCGTTGTGGGTGAGAGCATT---CCAGCCCTGTACGTCTTTGCCCAGGTC 48630 || | |||||||| | |||| || |||| | || | ||| ||| ||||| Sbjct 425786 AAAGTAGCGCTCGTCCTCCTTGAGCTTGTTGTCCCAGTCGTGCATGTCCTTGGAAAGGTC 425845 Query 48631 CACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGC-CCCATAT 48684 || ||||| | ||||||||||| || || || |||||| ||| |||| || Sbjct 425846 CATCTCTTCGGCGGTCCAGAAGGAGGCCTCAGCCTTCTTGTAC-TGCGCCCAGAT 425899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931531379412480