Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq21 176 8e-39 seq20 123 5e-23 seq11 93.3 8e-14 >seq21 Length=517387 Score = 176 bits (194), Expect = 8e-39 Identities = 447/677 (66%), Gaps = 5/677 (1%) Strand=Plus/Plus Query 221819 TTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATC 221878 ||||| ||||||||||||||||| ||||| || ||||| | ||||||| | ||||| Sbjct 16415 TTGGCGGCGTCCTTGTAGAGCATGAAGGGGTTACCGGTCTCGACCTGAGCCTCGAGAATG 16474 Query 221879 TTGTCCCAGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATAC 221938 || ||| || | | ||| | ||| ||||| | |||||| ||| || ||| Sbjct 16475 GCGTACCACAGCTTTTGCGCGGGGATGGTCTTCTTGGCGCGACCCTC---CTTCTCGTAC 16531 Query 221939 CCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCG 221998 | | |||| | |||| || |||||| |||||| || || ||| | |||| Sbjct 16532 TTGTTGAAGAGAGCCTTGAACTCGTCGCCGTACACCTCGTGGAGTCCGGGAGCCTCGGCG 16591 Query 221999 GGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATC 222058 || || | || ||||| | || | ||| | || |||||||||||| || ||| Sbjct 16592 GGGCAGAAGAGGGGCCAGTCGCCGGCCTCCTCGACACGCTCCATGAAGAGGTCGGGAATC 16651 Query 222059 CACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGA 222118 || || || |||||||| |||| || ||||||| ||||| ||| || | || Sbjct 16652 CAGAGGGCGAAGAAGAGATCCCTGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGAAGG 16711 Query 222119 TCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGT 222178 || | ||||| || ||||| |||||||| || || || |||| ||| | || ||||| Sbjct 16712 TCGAGGAACTCGAAGATGTCGGCGTGCCATGGTTCGAGGTAGATGGCGAAGGCTCCGGGG 16771 Query 222179 CGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGT 222238 |||||||| || ||||| || || | || |||| ||| || || | || Sbjct 16772 CGCTTGTTTCCTCCCTGGTCAACGTAGCGAGCCGTGTTGTTGTAGACACGGAGCATAGGG 16831 Query 222239 ACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTA 222298 | | ||||| || |||||||| || ||||||| || || | | ||| Sbjct 16832 ATGATGCCGTTCGAGTAGCCGTTGGTTCCGGCGATGTACGAGCCAGTCGCGCGGATGTT- 16890 Query 222299 CTGGCAG-ACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGT 222357 ||| | | ||||| || ||||| || ||||| | ||||||| ||||||| || Sbjct 16891 GTGGATGCTGAGTCCGATTCCTCCGGCCGTCTTGGAGATGAGGGCGCAGGTCTTGAGCGT 16950 Query 222358 GTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTG 222417 ||| ||| ||||| || ||||| ||||| | | | | || || || || || | ||| Sbjct 16951 GTCGTAGATACCCTCGATCGAGTCGTCCTTCATGGTGACGAGGAAGCAGGAGGAGAGCTG 17010 Query 222418 AGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGA 222477 | | | | | |||||| || || || || |||||| || ||||||| | || Sbjct 17011 GGGGTGAGGAGTTCCGGCGTTGAAGAGGGTCGGCGAGGCGTGGGTGAAGTAGCGCTCCGA 17070 Query 222478 CATCAGATCGTACGTCT 222494 ||| || | ||||| || Sbjct 17071 CATGAGGTTGTACGACT 17087 Score = 98.7 bits (108), Expect = 2e-15 Identities = 143/198 (72%), Gaps = 12/198 (6%) Strand=Plus/Plus Query 221422 GGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG---GCCTCGGGAGA 221478 ||| ||||||||||||||||| |||||| |||||| |||| |||||||| || Sbjct 15847 GGCGGCGTGGTAGATGGTCTCGAAGATCTGGAGGTTGAG---CTTGCGAGCCTCGGGCGA 15903 Query 221479 AGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGAT 221538 |||||||| || || | ||| ||||||| |||||||| |||||||| ||||| Sbjct 15904 GTCGAAGGGCAGGCGGAGGGCCATGAAGGCGTCGGCGAGTCCCTGCACTCCGATGCCGAT 15963 Query 221539 GGGCCTGTGTCTCCTGTTGGA---AGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTC 221595 ||| | ||| | ||| || ||||| | | || |||||||| |||||||||| Sbjct 15964 GGGGCGGTGACGGAGGTTCGAGTTCTCGGCCTCCT-TG--ACGGGATAGTAGTTGACGTC 16020 Query 221596 GATCAGATTGTTGAGGTT 221613 ||| | ||||||||| Sbjct 16021 GATGATGCGGTTGAGGTT 16038 >seq20 Length=589438 Score = 123 bits (136), Expect = 5e-23 Identities = 169/235 (72%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || |||| | ||||||||||||| | ||| |||||||||||||||||| || || Sbjct 425899 ATCTGGGCGCAGTACAAGAAGGCTGAGGCCTCCTTCTGGACCGCCGAAGAGATGGACCTT 425840 Query 25537 GCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 ||||||||||| ||| |||| || |||| | | ||||||| | ||| || Sbjct 425839 TCCAAGGACATGCACGACTGGGACAACAAGCTCAA--GGAGGACGAGCGCTACTTTATCC 425782 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 || |||| | || ||||| || || || |||||||| || |||||||| ||| |||| Sbjct 425781 AGCACGTCCTCGCCTTCTTCGCCGCTTCGGATGGTATCGTCAACGAGAACCTGCTCGAGC 425722 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 | ||| | || ||||||| || ||||| || |||||||| |||||||| Sbjct 425721 GCTTCTCGTCCGAGGTGCAGTGCGCCGAGGCTCGTTGCTTCTACGGATTCCAGAT 425667 >seq11 Length=836129 Score = 93.3 bits (102), Expect = 8e-14 Identities = 141/200 (71%), Gaps = 3/200 (2%) Strand=Plus/Plus Query 25921 GGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT 25980 || || || || ||||||| |||||||| || || ||||||||| || | ||| Sbjct 271954 GGCTCCTTCGCCTCCATCTTTTGGCTCAAAAAGCGAGGCCTCATGCCCGGTCTCTGCTTC 272013 Query 25981 TCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTAC 26040 |||||||| |||||| ||||||| || || |||| ||||| || ||||| |||| | Sbjct 272014 TCCAACGAACTCATCTCACGGGACGAAGGGCTGCACACCGATTTCGCTTGCCTCCTCTTC 272073 Query 26041 ACGGGCCACTTGCTCCACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCT 26100 || ||| ||| ||| ||| || ||| ||| |||| ||| | | || || Sbjct 272074 AC---CCATTTGAACCATCGACCATCAGAAGCGACTGTCTCTGCCATCGTGAGGGAAGCA 272130 Query 26101 GTGGAGATCGAGAAGGAGTT 26120 || ||||| ||||||||||| Sbjct 272131 GTAGAGATTGAGAAGGAGTT 272150 Score = 91.5 bits (100), Expect = 3e-13 Identities = 162/237 (68%), Gaps = 11/237 (5%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || |||| |||||||||||| || ||| ||| ||||| ||||||||||| || ||| Sbjct 271280 ATCTGGGCGATGTACAAGAAAGCGCAAGCCTCCTTTTGGACAGCCGAAGAGATCGACCTG 271339 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGC-------ATTTTCT 25589 | | ||| | | || |||| || ||| ||| ||||| ||| |||| Sbjct 271340 GGCGGCGACCTAGTCGACTGGAACACTCGGCTCAACGACGACGAGCGCTACTTCGTTTCC 271399 Query 25590 CAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGA 25649 || || | | || ||||| | || || ||||| || || || ||||||||| || Sbjct 271400 CATGTCC----TCGCCTTCTTCTCGGCGTCGGATGGCATCGTCAATGAGAATCTGGTGGA 271455 Query 25650 GAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 ||| |||| | || ||||||| | ||||| | ||| ||||| || |||||||| Sbjct 271456 GAGGTTCAGCTCCGAGGTGCAGTGTGCCGAGGCGAGGTGCTTCTATGGGTTCCAGAT 271512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843383511680