Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq6 95.1 1e-14 seq21 91.5 1e-13 >seq6 Length=1242253 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 24734 AAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGA-AACGGTAAAACAAAAGAT 24792 || || || || ||||| || || | ||||||| | || |||| ||| | || ||| Sbjct 238578 AAGACCATCACCCTCGAGGTCGAGTCGTCCGACACGATCGACAACGTTAAGGCCAA-GAT 238636 Query 24793 CCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCT 24852 ||| ||||| || || || |||||||| || || ||||||||||| ||||| || ||||| Sbjct 238637 CCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTTTGATCTTCGCCGGCAAGCAGCT 238696 Query 24853 GGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| | | | | || || || ||||| || ||||| ||||| || ||| | || Sbjct 238697 CGAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGT 238756 Query 24913 GTTGCGATTGCGCGGAGGC 24931 | | || | || || ||| Sbjct 238757 GCTCCGTCTCCGTGGTGGC 238775 >seq21 Length=517387 Score = 91.5 bits (100), Expect = 1e-13 Identities = 451/707 (64%), Gaps = 31/707 (4%) Strand=Plus/Plus Query 139302 CTCGTACTTTTCGTAGAGTTCGTCGAA-TCGTTCACCGTAGGCGTCAGAAAGATCGCGAC 139360 ||||||||| | | |||| | | ||| |||| | ||||| | || || || || Sbjct 16525 CTCGTACTTGTTGAAGAGAGCCTTGAACTCGT-CGCCGTACACCTCGTGGAGTCCGGGAG 16583 Query 139361 ACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGAT 139420 || | | || || | ||| | ||| ||||| | ||| ||| ||| |||||| || | Sbjct 16584 CCTCGGCGGGGCAGAAGAGGGGCCAGTCGCCGGCCTCCTCGACACGCTCCATGAAGAGGT 16643 Query 139421 CCGGAATCCACAAAGCGAACAGCAAATC----GCGCG--CCTTCTTATCTTCCGAACCCA 139474 | |||||||| | ||||| | | ||| ||||| ||| || | | ||| Sbjct 16644 CGGGAATCCAGAGGGCGAAGAAGAGATCCCTGGCGCGAACCTCCTCCT-TGCCG------ 16696 Query 139475 TGTTACGTTTC--ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGAT 139532 || | | || | | || ||||| || || | ||| |||||||||||||| || ||||| Sbjct 16697 TGGTTC-TTGCGAAGGTCGAGGAACTCGAAGATGTCGGCGTGCCATGGTTCGAGGTAGAT 16755 Query 139533 GGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAA 139589 ||| | || || || ||| || || || || |||| || | | || ||| | Sbjct 16756 GGCGAAGGCTCCGGGGCGCTTGTTTCCTCCCTGGTCAACGTAGCGAGCCGTGTTGTTGTA 16815 Query 139590 TACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGT----GCTACGGATGGGAC 139645 || || | ||| || | ||| ||| |||||||| || | | | | | | Sbjct 16816 GACACGGAGCATAGGGATGATGCCGTTCGAGTAGCCGTTGGTTCCGGCGATGTACGAGCC 16875 Query 139646 TGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTA 139705 || ||| |||| || || | ||| |||||||| ||| | ||||| || | Sbjct 16876 AGTCGCG----CGGATGTTGTGGATGCTGAGTCCGATTCCTCCGGCCGTCTTGGAGATGA 16931 Query 139706 AAACGCAA-TCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACC 139764 |||| || | | || ||||| ||||| || |||||||| ||| ||||| Sbjct 16932 GGGCGCAGGTCTTG-AGCGTGTCGTAGATACCCTCGATCGAGTCGTCCTTCATGGTGACG 16990 Query 139765 AGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCG 139824 || ||||| || || || || || | || ||||| || || || || ||| Sbjct 16991 AGGAAGCAGGAGGAGAGCTGGGGGTGAGGAGTTCCGGCGTTGAAGAGGGTCGGCGAGGCG 17050 Query 139825 TGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTT 139884 || ||||| | | |||||| | | ||||| | || ||| | |||| ||| Sbjct 17051 TGGGTGAAGTAGCGCTCCGACATGAGGTTGTACGACTGGAGAACGCGCTCAATGTCCGAG 17110 Query 139885 CCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCC 139944 |||||||||||||||| ||| ||||| ||||| || || || ||||| ||| ||| Sbjct 17111 CCGTGGATACCGACAGCGACACGCATGAGCATGTGCTGAGGTCGCTCGGCGACCTTGCCG 17170 Query 139945 TCGAtttttttCAGATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTA 139991 ||||| || ||| | ||| ||||||||| |||| ||||| Sbjct 17171 TCGATGCGAAGGAGGTAAGAGCGCTCGAGGGTCTTGAAGCCGAAGTA 17217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896913906160