Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq25 98.7 6e-16 seq6 98.7 6e-16 seq13 93.3 3e-14 seq1 84.2 1e-11 >seq25 Length=440178 Score = 98.7 bits (108), Expect = 6e-16 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||| | ||| ||||||||| ||||| || ||||| ||| |||| |||| Sbjct 156506 AGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCC 156447 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||||||||| || || |||||||| | || | ||||||||||| Sbjct 156446 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATTCCCTCCTTGTC 156388 >seq6 Length=1242253 Score = 98.7 bits (108), Expect = 6e-16 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| ||| ||||||||| ||||| |||||||| ||| |||| | || Sbjct 238759 AGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCC 238700 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||||| || |||||||| | || | ||||||||||| Sbjct 238699 TCGAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 238640 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | |||| || | |||||| || | ||| |||||| Sbjct 238639 TGGATCTTGGCCTTAACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 238580 Query 34946 TT 34947 || Sbjct 238579 TT 238578 Score = 89.7 bits (98), Expect = 3e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | ||| ||||||||| ||||| || ||||| ||| |||| | || Sbjct 237763 AGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCGTCC 237704 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||||||||||| || |||||||| | || | ||||||||||| Sbjct 237703 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTC 237645 >seq13 Length=743395 Score = 93.3 bits (102), Expect = 3e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| ||| ||||||||| ||||| |||||||| ||| |||| | || Sbjct 146995 AGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 147054 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||||||||| || || ||||| || | || | ||||||||||| Sbjct 147055 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGAATTCCCTCCTTGTC 147113 >seq1 Length=1866479 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/196 (69%), Gaps = 10/196 (5%) Strand=Plus/Minus Query 34768 GACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTC 34827 || |||||| | || ||||||||| ||||| |||||||| ||| ||| | || || Sbjct 727064 GAGCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCAGCCGTCCTC 727005 Query 34828 CAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTT 34887 || ||||| ||||||||||| || || |||||||| || | ||||||||||| | Sbjct 727004 GAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGCAGGGATGCCCTCCTTGTCCTC 726945 Query 34888 TATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || || |||||| |||||| ||| || | |||| | ||||| | | Sbjct 726944 GATCTTGGCCTTGACGTTGTCGATGCTGTCG-----GAGGACACGACCGCGACGGTGAGG 726890 Query 34943 GTCTTTCCCGTGAGGG 34958 |||||||| ||| || Sbjct 726889 GTCTTTCCGTTGAAGG 726874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692315735518