Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq21 185 8e-42 seq6 105 6e-18 seq1 105 6e-18 seq20 100 3e-16 seq25 93.3 4e-14 >seq21 Length=517387 Score = 185 bits (204), Expect = 8e-42 Identities = 509/767 (66%), Gaps = 25/767 (3%) Strand=Plus/Plus Query 148932 CTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACT 148991 |||||| ||||||||||| |||||| | || || || || ||||| | || | Sbjct 16412 CTGTTGGCGGCGTCCTTGTAGAGCATGAAGGGGTTACCGGTCTCGACCTGAGCCTCGAGA 16471 Query 148992 AT---GAACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCG 149048 || | ||| ||| | |||||| | | || || | ||||||||||| |||| Sbjct 16472 ATGGCGTACC---ACAGCTTTTGCGCGGGGATGGTCTTCTTGGCGCGACCCTCCTTCTCG 16528 Query 149049 TA--TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACT 149106 || | | | | ||| || |||| | |||||||| |||| ||| ||||| || Sbjct 16529 TACTTGTTGAAGAGAGC--CTTGAACTCGTCGCCGTACACCTCGTGGAGTCCGGGAGCCT 16586 Query 149107 TGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGG 149166 | ||||| | ||| | ||| ||||| || | | || |||| ||| || || |||| Sbjct 16587 CGGCGGGGCAGAAGAGGGGCCAGTCGCCGGCCTCCTCGACACGCTCCATGAAGAGGTCGG 16646 Query 149167 GCACCCAGAGCGCGTACATGAGGTCGC--GCGCCTTGCAGTCTTCGGCGCCCATGTTGCG 149224 | | |||||| ||| | | ||| || | |||| | || || ||| ||| Sbjct 16647 GAATCCAGAGGGCGAAGAAGAGATCCCTGGCGCGAACC--TCCTCCTTGCCGTGGTTCTT 16704 Query 149225 GCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGC 149284 ||| |||| ||| | ||| ||||| |||||||| || || | ||| | |||| || Sbjct 16705 GCGAAGGTCGAGGAACTCGAAGATGTCGGCGTGCCATGGTTCGAGGTAGATGGCGAAGGC 16764 Query 149285 GCCCTTGCGCTTG---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAAC 149341 || ||||||| || |||||||| |||| ||| || ||||||| | || || | Sbjct 16765 TCCGGGGCGCTTGTTTCCTCCCTGGTCAACGTAGCGAGCCGTGTTGTTGTAGACACGGAG 16824 Query 149342 CATAGGTTCAATGCCACTGGCAGT-GCCGTTAGTAGAGCTAATG--CGACTGCCGCGCGC 149398 |||||| ||||| | | ||| |||||| || | ||| ||| ||| ||| Sbjct 16825 CATAGGGATGATGCCGTTCG-AGTAGCCGTTGGTTCCGGCGATGTACGA--GCCAGTCGC 16881 Query 149399 TCGCACTTTGTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCAGT 149457 || | ||||| | | ||| ||||| || || ||||| ||| |||||| |||||| Sbjct 16882 GCGGATGTTGTGGATGCTGAGTCCGATTCCTCCGGCCGT-CTTGGAGATGAGGGCGCAGG 16940 Query 149458 CGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACG 149517 |||||| |||||| |||||||| |||| ||||||||| | || ||||| | Sbjct 16941 TCTTGAGCGTGTCGTAGATACCCTCGATCGAGTCGTCCTTCATGGTGACGAGGAAGCAGG 17000 Query 149518 AGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAAT 149577 || | | || || | | || ||||| ||| | ||| || |||||| || || | Sbjct 17001 AGGAGAGCTGGGGGTGAGGAGTTCCGGCGTTGAAGAGGGTCGGCGAGGCGTGGGTGAAGT 17060 Query 149578 ATTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGC 149637 | || ||| | | |||||||| ||| ||||| || ||||| ||| ||||| | Sbjct 17061 AGCGCTCCGACATGAGGTTGTACGACTGGAGAACGCGCTCAATGTCCGAGCCGTGGATAC 17120 Query 149638 CTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTG 149684 | | ||||| ||||| ||||| ||||| |||||||| || || ||| Sbjct 17121 CGACAGCGACACGCATGAGCATGTGCTGAGGTCGCTCGGCGACCTTG 17167 >seq6 Length=1242253 Score = 105 bits (116), Expect = 6e-18 Identities = 124/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| ||||| ||||| || ||||| || | ||| |||||||||||||||||| Sbjct 238745 GGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCC 238686 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||||||||||||||||||||| |||||||| |||||| ||| Sbjct 238685 GGCGAAGATCAAACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTT 238626 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTT 133630 | | || | |||||||| | ||| || |||| ||||| ||| || Sbjct 238625 AACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTT 238578 Score = 93.3 bits (102), Expect = 4e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| ||||| ||||| || |||||||| | ||| |||||||||||||||||| Sbjct 237749 GGTCGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCC 237690 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||| | || | ||||||||||||||||||||||| |||||||| |||||| Sbjct 237689 GGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTT 237636 >seq1 Length=1866479 Score = 105 bits (116), Expect = 6e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| || | ||| | |||||||||||||||||| Sbjct 727051 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCAGCCGTCCTCGAGCTGCTTGCCG 726992 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | ||||| ||||||||||| | ||||||||| |||||||| |||||| |||| Sbjct 726991 GCGAAGATGAGACGCTGCTGGTCCGCAGGGATGCCCTCCTTGTCCTCGATCTTGGCCTTG 726932 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 | | || | |||||| || | | || ||||||||| ||| || ||| Sbjct 726931 ACGTTGTCGATGCTGTCGGAGGACACGACCGCGACGGTGAGGGTCTTTCCG 726881 >seq20 Length=589438 Score = 100 bits (110), Expect = 3e-16 Identities = 201/293 (69%), Gaps = 19/293 (6%) Strand=Plus/Plus Query 120463 ACGAGCAGTCGGTCCGCTACAAACTCAATGTACTCGCACATG-GACTGCGCGTTCATGCC 120521 || || || ||||| || || ||||| ||||||| ||||||| | || |||||||| || Sbjct 424968 ACAAGGAGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAGGGTG-GCGTTCATTCC 425026 Query 120522 CAGCAACGCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCT- 120580 | | | || || | ||| |||| |||||||||||||| || || ||||| Sbjct 425027 GATGAGGGAGACGGGGAGGGCCTCGGTGAGGAACTCCTTCTCAATCTCGACGGCCTCGCG 425086 Query 120581 --TGAACATGGCGAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGT-AGT 120637 ||| ||| ||| ||| | ||| || | ||| || || | || Sbjct 425087 GATGATCATCTCGACG-----GTGTCGGGG-----TGAGGGCGACGCTCGAGATGAGAGA 425136 Query 120638 ACA---GGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAA 120694 ||| |||| |||||||| ||||| ||||| ||||||||||| || ||||||||| | Sbjct 425137 ACATGAGGCAGGCAAAGTCGGTGTGAAGGCCTTCGTCGCGCGAGATGAGCTCGTTGGAGA 425196 Query 120695 ACGTCAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAG 120747 | || || |||||||||| ||| | |||||| |||| |||| ||| ||| Sbjct 425197 AGGTGAGTCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAG 425249 Score = 89.7 bits (98), Expect = 5e-13 Identities = 101/133 (76%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 121023 CTCGATAAGGTTAATATTCACGATACTGTCGGCGGCGGCGAAGAACGCCAGCACGTGCTT 121082 ||||| ||||| || ||||||| || | ||||||||||| || || ||||||| Sbjct 425723 CTCGAGCAGGTTCTCGTTGACGATACCATCCGAAGCGGCGAAGAAGGCGAGGACGTGCTG 425782 Query 121083 GATAAAGTGTCGCTCGTCGTCCGTGAGCTTGTGCGCAAAATCGT-CATAGTCCTTGGACA 121141 |||||||| |||||||| ||| ||||||||| | | |||| ||| ||||||||| | Sbjct 425783 GATAAAGTAGCGCTCGTCCTCCTTGAGCTTGTTGTCCCAGTCGTGCAT-GTCCTTGGAAA 425841 Query 121142 GGTCGACCTCCTC 121154 |||| | ||| || Sbjct 425842 GGTCCATCTCTTC 425854 >seq25 Length=440178 Score = 93.3 bits (102), Expect = 4e-14 Identities = 103/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| ||||| || |||||||| | ||| | | | |||||||| Sbjct 156500 AAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCA-TCCTCGAG 156442 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| ||| | ||||| |||||||||||||| || || || |||||||| ||| Sbjct 156441 CTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGAT 156382 Query 133574 CTTTTGCTTGAGCTG 133588 ||| ||||| ||| Sbjct 156381 CTTGGCCTTGACCTG 156367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420062783280