Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq21 179 5e-39 seq20 125 1e-22 seq8 100 4e-15 seq18 96.9 5e-14 seq11 96.9 5e-14 seq14 93.3 6e-13 >seq21 Length=517387 Score = 179 bits (198), Expect = 5e-39 Identities = 278/396 (70%), Gaps = 21/396 (5%) Strand=Plus/Minus Query 259790 GTCGTCGAGCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGC- 259848 |||| |||||| || ||| | ||||||||||||||||| | | ||| | | Sbjct 17163 GTCGCCGAGCGACCTCAGCACATGCTCATGCGTGTCGC----------TGTCGGTATCCA 17114 Query 259849 CGACGTCGACAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTT 259908 || | |||| || ||| ||| ||| | ||| | ||||||| ||| | Sbjct 17113 CGGCTCGGACATTG------AGCGCGTTCTCCAGTCGTACAACCTCATGTCGGAGCGCTA 17060 Query 259909 GTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTC 259968 |||||| || |||| || ||||| || ||||| || || | ||| ||| || || Sbjct 17059 CTTCACCCACGCCTCGCCGACCCTCTTCAACGCCGGAACTCCTCACCCCCAGCTCTCCTC 17000 Query 259969 GTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCA 260028 ||||| || | |||||||| ||| ||||||||||| ||||| |||||||||||| Sbjct 16999 CTGCTTCCTCGTCACCATGAAGGACGACTCGATCGAGGGTATCTACGACACGCTCAAGAC 16940 Query 260029 GTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCA--CACAAGGTGCGC 260086 ||||| |||||||||||| ||||||| || ||||| | | ||| ||||| | ||| Sbjct 16939 CTGCGCCCTCATCTCCAAGACGGCCGGAGGAATCGGACT--CAGCATCCACAACATCCGC 16882 Query 260087 GCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTT 260146 || | ||| | ||| | || || ||||||||| | || |||||| | | || ||||| Sbjct 16881 GCGACTGGCTCGTACATCGCCGGAACCAACGGCTACTCGAACGGCATCATCCCTATGCTC 16822 Query 260147 CGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 || || | ||| ||||||| |||||||| |||||| Sbjct 16821 CGTGTCTACAACAACACGGCTCGCTACGTTGACCAG 16786 Score = 109 bits (120), Expect = 8e-18 Identities = 245/373 (66%), Gaps = 12/373 (3%) Strand=Plus/Minus Query 261796 CAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTCATCAACTG 261855 ||||||| || ||||| ||| |||||| ||||| |||||||||||| || || | | Sbjct 16777 CAAGCGCCCCGGAGCCTTCGCCATCTACCTCGAACCATGGCACGCCGACATCTTCGAGTT 16718 Query 261856 GCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGCGATCTCTT 261915 || ||||| |||||||||||||| ||||| || |||| | |||||||| Sbjct 16717 CCTCGACCTTCGCAAGAACCACGGCAA-GGAGGAGG-----TTCGCGCCAGGGATCTCTT 16664 Query 261916 TTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGCGACTGGTC 261975 | || ||| |||| |||||| || ||| || | | | | | |||||||| | Sbjct 16663 CTTCGCCCTCTGGATTCCCGACCTCTTCATGGAGCGTGTCGAGGAGGCCGGCGACTGGCC 16604 Query 261976 GCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCCTTTGACGC 262035 ||||| ||||| ||||||| ||||| || ||||| || |||| | || | || Sbjct 16603 CCTCTTCTGCCCCGCCGAGGCTCCCGGACTCCACGAGGTGTACGGCGACGAGTTCAAGGC 16544 Query 262036 CCTCT---ATGAGNNNNNNNNNNNNNNNNNNNNNNCGCGGACCGTCGTGCCCGCACGACA 262092 |||| | || | |||| || ||||| | | | Sbjct 16543 TCTCTTCAACAAGTACGAGAAGGAGGGTCGCGCCAAGAAGACCATC---CCCGCGCAAAA 16487 Query 262093 GATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAA 262152 | | |||| |||||| ||| ||| || |||||||||| | |||| |||| ||||||| Sbjct 16486 GCTGTGGTACGCCATTCTCGAGGCTCAGGTCGAGACCGGTAACCCCTTCATGCTCTACAA 16427 Query 262153 GGACGCCGTCAAC 262165 |||||||| |||| Sbjct 16426 GGACGCCGCCAAC 16414 >seq20 Length=589438 Score = 125 bits (138), Expect = 1e-22 Identities = 112/138 (81%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 1456522 GATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGC 1456581 ||||||| ||||||||||||||| ||||| ||||| ||| |||| | || || || | Sbjct 425093 GATCATCCGCGAGGCCGTCGAGATTGAGAAGGAGTTCCTCACCGAGGCCCTCCCCGTCTC 425034 Query 1456582 GCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGC 1456641 |||||||| |||||||||||| ||||||||||||||||| | | || |||||||||||| Sbjct 425033 CCTCATCGGAATGAACGCCACC-CTCATGTGCCAGTACATCG-AGTTCGTCGCCGACCGC 424976 Query 1456642 CTGCTCGCGGCGCTCGGC 1456659 || || | | |||||| Sbjct 424975 CTCCTTGTCTCCCTCGGC 424958 Score = 114 bits (126), Expect = 2e-19 Identities = 159/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 1455791 CAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGT 1455850 ||| ||||| ||||||||||| ||||||||||| ||| | ||||| | |||| | Sbjct 425885 CAAGAAGGCTGAGGCCTCCTTCTGGACCGCCGAAGAGATGGACCTTTCCAAGGACATGCA 425826 Query 1455851 CCACTGGG---TGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTT 1455907 | |||||| ||| | || ||||||||| | || ||| |||||||||||||| | Sbjct 425825 CGACTGGGACAACAAGCTCAAGGAGGACGAGCGCTACTTTATCCAGCACGTCCTCGCC-T 425767 Query 1455908 TTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGG 1455967 | |||||||| ||||| ||||| |||||||||| || ||||| | |||| Sbjct 425766 TCTTCGCCGCTTCGGATGGTATCGTCAACGAGAACCTGCTCGAGCGCTTCTCGTCCGAGG 425707 Query 1455968 TCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008 | || | | ||||| |||| || ||||| ||||||||| Sbjct 425706 TGCAGTGCGCCGAGGCTCGTTGCTTCTACGGATTCCAGATC 425666 >seq8 Length=1034295 Score = 100 bits (110), Expect = 4e-15 Identities = 135/185 (73%), Gaps = 6/185 (3%) Strand=Plus/Minus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 |||||||| | ||||||||||| ||||||||||| |||||| || ||| ||| Sbjct 154742 TACTCGTCGTACATCTACAAGGTCCTCAAGCAGGTCCACCCCGACAC---TGGA--ATC- 154689 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 ||||||||| ||||| ||| | |||||||| ||||||||||| |||| ||||||| | Sbjct 154688 TCCAACAAGGCCATGCTCATCCTCAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCC 154629 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078 ||||||| || || || ||||||| || ||| | | ||||||||| Sbjct 154628 GGCGAGGCCTCCAAGCTTGCTTCCTACAACAAGAAGTCGACCATCTCCTCCCGCGAGATC 154569 Query 725079 CAGAC 725083 ||||| Sbjct 154568 CAGAC 154564 >seq18 Length=605011 Score = 96.9 bits (106), Expect = 5e-14 Identities = 94/118 (80%), Gaps = 6/118 (5%) Strand=Plus/Minus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 |||||||||| ||||||||||| ||||||||||| |||||| || ||| ||| Sbjct 376311 TACTCGTCCTACATCTACAAGGTCCTCAAGCAGGTCCACCCCGACAC---TGGA--ATC- 376258 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCG 725016 ||||||||| ||||| ||| | |||||||| ||||||||||| |||| ||||||| Sbjct 376257 TCCAACAAGGCCATGCTCATCCTCAACTCGTTCGTCAACGACATCTTCGAGCGCATCG 376200 Score = 96.9 bits (106), Expect = 5e-14 Identities = 94/118 (80%), Gaps = 6/118 (5%) Strand=Plus/Plus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 |||||||||| ||||||||||| ||||||||||| |||||| || ||| ||| Sbjct 498473 TACTCGTCCTACATCTACAAGGTCCTCAAGCAGGTCCACCCCGACAC---TGGA--ATC- 498526 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCG 725016 ||||||||| ||||| ||| | |||||||| ||||||||||| |||| ||||||| Sbjct 498527 TCCAACAAGGCCATGCTCATCCTCAACTCGTTCGTCAACGACATCTTCGAGCGCATCG 498584 >seq11 Length=836129 Score = 96.9 bits (106), Expect = 5e-14 Identities = 169/239 (71%), Gaps = 9/239 (4%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| |||| |||||| | |||| | || ||||||||||||| ||||| ||| |||||| Sbjct 271279 GATCTGGGCGATGTACAAGAAAGCGCAAG-CCTCCTTTTGGACAGCCGAAGAGATCGACC 271337 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTCATCA 1455891 | |||| |||| ||| ||||| | ||| | ||||||||||||| | ||| | Sbjct 271338 TGGGCGGCGACCTAGTCGACTGGAACACTCGGCTCAACGACGACGAGCGCTACTTCGTTT 271397 Query 1455892 AGCACGTCCTCGCCTT-TTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGG 1455950 || ||||||||||| || ||| || | ||||||||||| ||||| |||| | Sbjct 271398 CCCATGTCCTCGCCTTCTTCTCGGCGTC--GGATGGCATCGTCAATGAGAATCTGGTGGA 271455 Query 1455951 CCGCTTTATGAAAGAGGTCCAAT-TGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008 | || | ||||| || | |||| ||||| | | || || |||||||||||| Sbjct 271456 GAGGTTCAGCTCCGAGGTGCAGTGTGCC-GAGGCGAGGTGCTTCTATGGGTTCCAGATC 271513 >seq14 Length=726854 Score = 93.3 bits (102), Expect = 6e-13 Identities = 120/163 (74%), Gaps = 2/163 (1%) Strand=Plus/Plus Query 1818076 AGGGCGTCACGCGCTCGGGAAAGGTGAGCGTCTTGA-CGATCTCATAGGGCACGCCCACC 1818134 |||| || || |||||||| ||||||| || || ||||| ||||| ||||| || Sbjct 279198 AGGGAGTGACACGCTCGGGGTAGGTGAG-GTTGCGAGCGATCGAGTAGGGGACGCCGACT 279256 Query 1818135 TCGTCAATGTCAATCTCGGGGTCGGGGCTGATGACGGCGCGCGCGGTAAAGTTGACGCGC 1818194 || || | | | | ||||||| | ||||||||| ||| || | |||| ||| ||| Sbjct 279257 TCATCGAGAGCGAGGTTGGGGTCGCCGGTGATGACGGTGCGGGCTGAGAAGTCGACTCGC 279316 Query 1818195 TTGCCCATGCAATTGCCGCGGATCCTGCCCTCCTTGCCCTTGA 1818237 ||||||||| || ||||||| | ||| ||||||||||||| Sbjct 279317 TTGCCCATGAGGTTACCGCGGAGTCGGCCTTCCTTGCCCTTGA 279359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177799432875764