Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq6 122 9e-23 seq13 84.2 2e-11 >seq6 Length=1242253 Score = 122 bits (134), Expect = 9e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||||||| || || || ||||| || ||||||||||| Sbjct 238774 CCACCACGGAGACGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 238715 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| |||||||| ||||| || || |||||||||||||| ||||| || Sbjct 238714 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGAGGG 238655 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || || || ||| | ||||||||||| || || Sbjct 238654 ATGCCCTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATCGTGTCGGACGACTCGACC 238595 Query 134667 TCGAGAGTAATGGTTTT 134683 ||||| || ||||| || Sbjct 238594 TCGAGGGTGATGGTCTT 238578 >seq13 Length=743395 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 134486 TCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCC 134545 ||| || | ||| || | ||| | ||| || || || ||||| || ||||||||||| Sbjct 146979 TCCACCACGGAGACGAAGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 147038 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || |||| | ||| |||||||| ||||| || || || | |||||||||||| || || Sbjct 147039 AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGG 147098 Query 134606 TATGCCTTCTTTTTCTTGAATTTT 134629 || || || || || || || || Sbjct 147099 AATTCCCTCCTTGTCCTGGATCTT 147122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397629267440