Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq21 178 2e-39 seq11 96.9 4e-15 seq20 86.0 7e-12 >seq21 Length=517387 Score = 178 bits (196), Expect = 2e-39 Identities = 486/738 (66%), Gaps = 15/738 (2%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| ||||| ||||||| || || ||||||| || || |||||||| || Sbjct 17151 CCTCAGCACATGCTCATGCGTGTCGCTGTCGGTATCCACGGCTCGGACATTGAGCGCGTT 17092 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 104341 | || | ||| || ||||| | | |||| ||||| | || ||||||||| Sbjct 17091 CTCCAGTCGTACAACCTCATGTCGGAGCGCTACTTCACCCACGCCTCGCCGACCCTCTTC 17032 Query 104342 AATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 104401 || || || || || ||||| | ||| |||||||| || ||| ||||| ||| Sbjct 17031 AACGCCGGAACTCCTCACCCCCAGCTCTCCTCCTGCTTCCTCGTCACCATGAAGGACGAC 16972 Query 104402 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 104461 || ||| | |||||||| | || || | | || || | ||||| ||| ||| || Sbjct 16971 TCGATCGAGGGTATCTACGACACGCTCAAGACCTGCGCCCTCATCTCCAAGACGGCCGGA 16912 Query 104462 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGGA-CAA 104519 || || || | |||||| | | | || | | |||||| ||| ||| | | Sbjct 16911 GGAATCGGACTCAGCATCCACAACATCCGCGCGACTGG--CTCGTACATCGCCGGAACCA 16854 Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579 | || | || | || || || || ||||| || || | ||| ||| || ||||| | Sbjct 16853 ACGGCTACTCGAACGGCATCATCCCTATGCTCCGTGTCTACAACAACACGGCTCGCTACG 16794 Query 104580 TAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 | | || | || ||| | ||| | |||| |||| || || ||||||| Sbjct 16793 TTGACCAGGGAGGAAACAAGCGCCCC---GGAGCCTTCGCCATCTACCTCGAACCATGGC 16737 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 |||| || ||| | |||||||| || | || ||||| || | ||||||| || Sbjct 16736 ACGCCGACATCTTCGAGTTCCTCGACCTTCGCAAGAACCACGGCAAGGAGGAGGTTCGCG 16677 Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 | | |||||||||| ||| ||||||||||| || ||||||||| || | || |||||| Sbjct 16676 CCAGGGATCTCTTCTTCGCCCTCTGGATTCCCGACCTCTTCATGGAGCGTGTCGAGGAGG 16617 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813 ||| | ||| | ||||| || || | | |||| || || ||| ||| | || | Sbjct 16616 CCGGCGACTGGCCCCTCTTCTGCCCCGCCGAGGCTCCCGGACTCCACGAGGTGTACGGCG 16557 Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGC 104873 | ||||| | || || | || ||||||||| | || ||||| || | ||| | | Sbjct 16556 ACGAGTTCAAGGCTCTCTTCAACAAGTACGAGAAGGAGGGTCGCGCCAAGAAGACCATCC 16497 Query 104874 CAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAC 104932 | || || | | ||||| | || |||||| || |||| |||||| |||| || | | Sbjct 16496 CCGC-GCAAAAGCTGTGGTACGCCATTCTCGAGGCTCAGGTCGAGACCGGTAACCCCTTC 16438 Query 104933 ATGCTTTACAAAGACGCC 104950 ||||| ||||| |||||| Sbjct 16437 ATGCTCTACAAGGACGCC 16420 >seq11 Length=836129 Score = 96.9 bits (106), Expect = 4e-15 Identities = 79/96 (82%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 94849 GGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTC 94908 || |||||| | | || | ||||||||| |||||||| |||||||| |||||||||||| Sbjct 271954 GGCTCCTTCGCCTCCATCTTTTGGCTCAAAAAGCGAGGCCTCATGCCCGGTCTCTGCTTC 272013 Query 94909 TCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||||||| || ||||| || ||||| || || ||| Sbjct 272014 TCCAACGAACTCATCTCACGGGACGAAGGGCTGCAC 272049 >seq20 Length=589438 Score = 86.0 bits (94), Expect = 7e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 94849 GGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTC 94908 || |||||| | | || | |||||||||||||| || |||||||| || ||| |||| Sbjct 425254 GGATCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGACTCACCTTC 425195 Query 94909 TCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||||||||||| ||||| || ||||| || || ||| || ||||| Sbjct 425194 TCCAACGAGCTCATCTCGCGCGACGAAGGCCTTCACACCGACTTTGC 425148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259910527280