Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq21 280 2e-70 seq14 86.0 7e-12 >seq21 Length=517387 Score = 280 bits (310), Expect = 2e-70 Identities = 499/728 (69%), Gaps = 0/728 (0%) Strand=Plus/Minus Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTC 53239 |||||| | | ||||||| ||||| | ||||||||||| ||| ||| || Sbjct 17151 CCTCAGCACATGCTCATGCGTGTCGCTGTCGGTATCCACGGCTCGGACATTGAGCGCGTT 17092 Query 53240 CGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTC 53299 | || ||||| || | ||| | ||||| || |||||| |||| ||||| ||| Sbjct 17091 CTCCAGTCGTACAACCTCATGTCGGAGCGCTACTTCACCCACGCCTCGCCGACCCTCTTC 17032 Query 53300 AACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGAC 53359 ||||| || || |||||| ||| | || ||||||||| || | |||||||| ||| Sbjct 17031 AACGCCGGAACTCCTCACCCCCAGCTCTCCTCCTGCTTCCTCGTCACCATGAAGGACGAC 16972 Query 53360 TCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGT 53419 |||||||| || |||||||| ||||||||| || |||| |||||||||| | | || Sbjct 16971 TCGATCGAGGGTATCTACGACACGCTCAAGACCTGCGCCCTCATCTCCAAGACGGCCGGA 16912 Query 53420 GGTATCGGTATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAAC 53479 || ||||| || | | ||| |||| |||| ||| | ||| || || ||| Sbjct 16911 GGAATCGGACTCAGCATCCACAACATCCGCGCGACTGGCTCGTACATCGCCGGAACCAAC 16852 Query 53480 GGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTC 53539 ||| | | | || ||| | ||||||||||| |||| |||||||||||| || ||||| Sbjct 16851 GGCTACTCGAACGGCATCATCCCTATGCTCCGTGTCTACAACAACACGGCTCGCTACGTT 16792 Query 53540 AACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCC 53599 ||||||| || |||||| || | ||||||||||||||||| || ||||||||| Sbjct 16791 GACCAGGGAGGAAACAAGCGCCCCGGAGCCTTCGCCATCTACCTCGAACCATGGCACGCC 16732 Query 53600 GACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGT 53659 ||||| | ||||| ||||| || || ||| || || | || ||| | ||| | | Sbjct 16731 GACATCTTCGAGTTCCTCGACCTTCGCAAGAACCACGGCAAGGAGGAGGTTCGCGCCAGG 16672 Query 53660 GACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAG 53719 || || || || || |||||||| |||||||||||| | || ||| ||| || Sbjct 16671 GATCTCTTCTTCGCCCTCTGGATTCCCGACCTCTTCATGGAGCGTGTCGAGGAGGCCGGC 16612 Query 53720 GAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAG 53779 || ||| ||| | ||||| |||| ||||| ||||| | || ||||| || ||| Sbjct 16611 GACTGGCCCCTCTTCTGCCCCGCCGAGGCTCCCGGACTCCACGAGGTGTACGGCGACGAG 16552 Query 53780 TTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCG 53839 || || | | | | ||||| |||| ||| |||||||| || ||| Sbjct 16551 TTCAAGGCTCTCTTCAACAAGTACGAGAAGGAGGGTCGCGCCAAGAAGACCATCCCCGCG 16492 Query 53840 CGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGC 53899 | || | ||| | || || ||| || ||||| ||||| || | || | |||| | Sbjct 16491 CAAAAGCTGTGGTACGCCATTCTCGAGGCTCAGGTCGAGACCGGTAACCCCTTCATGCTC 16432 Query 53900 TACAAGGA 53907 |||||||| Sbjct 16431 TACAAGGA 16424 Score = 100 bits (110), Expect = 3e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 55727 CTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGT 55786 ||||||| || ||| ||| || |||||||| | ||||||| | || ||| | Sbjct 15280 CTCAAGGCCATCTACAAGACCGTCTGGGAGATCTCCCAGAAGACCATCATCGACCTCTCG 15221 Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846 || || ||||| || | ||||||||| |||||| || ||||| | || || || Sbjct 15220 GCCGACCGTGGAGCCTTTATCGACCAGAGCCAGTCGCTCAACATTCACTTGTCGAGCCCC 15161 Query 55847 TCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906 | ||||| || | | |||||||||||| ||||| ||||||| |||||||||||| || Sbjct 15160 ACCATGGCCCAGCTCACCTCGATGCACTTCTACGGATGGAAGAGGGGACTCAAGACCGGC 15101 Query 55907 ATG 55909 ||| Sbjct 15100 ATG 15098 Score = 91.5 bits (100), Expect = 2e-13 Identities = 154/218 (71%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 55139 AACCTGAACCGGGTCATCGACAAGAATTACTA-CCCGACTGAAGCGGCGCGCAAGTCCAA 55197 ||||| ||||| |||||||| || ||||| |||| | | | ||| || || || Sbjct 16038 AACCTCAACCGCATCATCGACGTCAACTACTATCCCGTCA-AGGAGGCCGAGAACTCGAA 15980 Query 55198 CCTCCGGCACCGGCCCATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATGCT 55257 |||||| ||||| ||||||| |||||| || ||||| | |||||| ||||||| || Sbjct 15979 CCTCCGTCACCGCCCCATCGGCATCGGAGTGCAGGGACTCGCCGACGCCTTCATGGCCCT 15920 Query 55258 CGGATTGCCCTTCGACTCGGAACCTGCTCGAGAAATTAACCAGGACATCTTC-AGTCGCA 55316 | | |||||||||||||| ||||| | | |||| | |||||| || | || Sbjct 15919 CCGCCTGCCCTTCGACTCGCCCGAGGCTCGCAAGCTCAACCTCCAGATCTTCGAGAC-CA 15861 Query 55317 TCTACTTTGCAGCGCTCGAGGAGTCGTGTCATCTGGCT 55354 ||||| || || ||||| |||||| || ||||| Sbjct 15860 TCTACCACGCCGCCATCGAGTCGTCGTGCGATATGGCT 15823 >seq14 Length=726854 Score = 86.0 bits (94), Expect = 7e-12 Identities = 108/147 (73%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 152063 CACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGC 152122 ||||||| | | ||||||| |||||||| ||| ||||||| ||| | ||||||| | Sbjct 632308 CACCTGCAAAC-GCGTTCCGAACTGTCCGTTGGGGTCGAGGACGTTCAAGTTGTTGCTAC 632250 Query 152123 CCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGAT 152182 | ||||| | |||||| | | | || ||||||||||| || || |||||||| | Sbjct 632249 CGACGAACTGCTGAGCGAGACCGATGATGGTGCCCTGCAGCGAGGCGTCTCCGTGGTGGT 632190 Query 152183 ACGCCGTCTGCTCCGCGATGTATCCCG 152209 |||||| ||||| | | ||| |||| Sbjct 632189 ACGCCGAGTGCTCGGAAACGTAACCCG 632163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215165495600