Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq21 152 6e-32 seq6 122 1e-22 seq13 118 1e-21 seq25 109 6e-19 seq1 93.3 5e-14 seq14 89.7 6e-13 >seq21 Length=517387 Score = 152 bits (168), Expect = 6e-32 Identities = 480/738 (65%), Gaps = 17/738 (2%) Strand=Plus/Plus Query 81022 GCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCC 81081 |||||||||||| |||| | ||| |||||||||||||||| | || ||| ||||||| | Sbjct 16421 GCGTCCTTGTAGAGCATGAAGGGGTTACCGGTCTCGACCTGAGCCTCGAGAATGGCGTAC 16480 Query 81082 CAAATCT----CGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGC 81137 || | || |||| | | | | | | ||| | ||||| | |||||| Sbjct 16481 CACAGCTTTTGCGCGGGGATGGTCTTCTTGGCGCGACCCTCCTTCT----CGTACTTGTT 16536 Query 81138 GTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCAC-TCGTTAGGGC 81196 | | | | ||||| | | |||| | || ||| ||| ||| | ||| |||| Sbjct 16537 GAAGAGAGCCTTGAACTCGTCGCCGTACACCTC-GTGGAGTCCGGGAGCCTCGGCGGGGC 16595 Query 81197 ACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGA 81256 | | ||| |||||||| | | | ||| ||| || |||||| ||| || ||||||| Sbjct 16596 AGAAGAGGGGCCAGTCGCCGGCCTCCTCGACACGCTCCATGAAGAGGTCGGGAATCCAGA 16655 Query 81257 GGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGA 81316 ||||| ||| || || | | ||| ||||||| | || ||||| ||| | |||| Sbjct 16656 GGGCGAAGAAGAGATCCCTGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGAAGGTCGA 16715 Query 81317 GAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGAC 81376 | || || | |||||| || |||||||| || || || | ||||| | || ||| Sbjct 16716 GGAACTCGAAGATGTCGGCGTGCCATGGTTCGAGGTAGATGGCGAAGGCTCCGGGGCGCT 16775 Query 81377 GG---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGA 81433 | || ||||||| ||||| || || || ||| | ||||| | ||||||||||| Sbjct 16776 TGTTTCCTCCCTGGTCAACGTAGCGAGCCGTGTTGTTGTAGACACGGAGCATAGGGATGA 16835 Query 81434 TACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGA 81493 | || | || | ||||| || || |||| ||| || | ||||| | ||| || Sbjct 16836 TGCCGTTCGAGTAGCCGTTGGTTCCGGCGATGTACGAGCCAGTCGCGCGGATGTTGTGGA 16895 Query 81494 TTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCAT 81553 | || ||||| || || | | ||| || || | || || || | || || | Sbjct 16896 TGCTGAGTCCGATTCCTCCGGCCGTCTTGGAGATGAGGGCGCAGGTCTTGAGCGTGTCGT 16955 Query 81554 AAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGC 81613 | || |||||||| || | |||||| | | ||| ||| || | ||| ||| Sbjct 16956 AGATACCCTCGATCGAGTCGTCCTTCATGGTGACGAGGAAGCAGGAGGAGAGCTGGGGG- 17014 Query 81614 TTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACAT 81671 | ||| ||||| ||||| || || || | ||||| |||| || || | ||||| Sbjct 17015 -TGAGGAGTTCCGGCGTTGAAGAGGGTCGGCGAGGCGTGGGTGAAGTAGCGCTCCGACAT 17073 Query 81672 CAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACG 81731 |||| || | | ||||| ||| || ||||| ||||||| ||| ||||| Sbjct 17074 GAGGTTGTACGACTGGAGAACGCGCTCAATGTCCGAGCCGTGGATACCGACAGCGACACG 17133 Query 81732 CATAAACATGTACTGGGG 81749 ||| | ||||| ||| || Sbjct 17134 CATGAGCATGTGCTGAGG 17151 >seq6 Length=1242253 Score = 122 bits (134), Expect = 1e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27436 AAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATT 27495 ||||| || || || ||||| ||||| || | || | || | ||||| || || Sbjct 238578 AAGACCATCACCCTCGAGGTCGAGTCGTCCGACACGATCGACAACGTTAAGGCCAAGATC 238637 Query 27496 CAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTC 27555 |||||||||||||| || ||||| |||||||||||| | || || || || ||||| ||| Sbjct 238638 CAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTTTGATCTTCGCCGGCAAGCAGCTC 238697 Query 27556 GAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTC 27615 ||||| | || ||||| | ||||| || |||| ||||| || || ||||| || || Sbjct 238698 GAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTG 238757 Query 27616 TTGCGTCTTCGCGGTGG 27632 | ||||| || ||||| Sbjct 238758 CTCCGTCTCCGTGGTGG 238774 Score = 104 bits (114), Expect = 3e-17 Identities = 113/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 27484 AAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCT 27543 ||||| || || |||||||||||||| || ||||| ||||||||||| | || || || Sbjct 237630 AAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCTTGATCTTCGCC 237689 Query 27544 GGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACT 27603 || ||||| |||||||| | || ||||| | || || || |||| ||||| || || Sbjct 237690 GGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGATTACAACATCCAGAAGGAGTCGACC 237749 Query 27604 CTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 || || || || | ||||| || |||||| Sbjct 237750 CTCCACCTCGTGCTCCGTCTCCGTGGTGGA 237779 >seq13 Length=743395 Score = 118 bits (130), Expect = 1e-21 Identities = 116/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 27484 AAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCT 27543 ||||| || || |||||||||||||||||||| || || ||||||||||| || || || Sbjct 147128 AAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCTGATCAGCAGCGTCTCATCTTCGCC 147069 Query 27544 GGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACT 27603 || ||||| |||||||| | || ||||| | ||||| || |||| ||||| || || Sbjct 147068 GGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACC 147009 Query 27604 CTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 ||||| | || | ||||| || |||||| Sbjct 147008 CTTCACTTGGTGCTTCGTCTCCGTGGTGGA 146979 >seq25 Length=440178 Score = 109 bits (120), Expect = 6e-19 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || || | | | ||||| || || |||||||||||||||||||| || |||||| Sbjct 156355 GATATCACTGTACAGGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCCGACCAG 156414 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| |||||||||| || ||||| | || || || Sbjct 156415 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGATTACAAC 156474 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 |||| ||||| || || || || Sbjct 156475 ATCCAGAAGGAGTCGACCCTCCA 156497 >seq1 Length=1866479 Score = 93.3 bits (102), Expect = 5e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || ||||| | || | ||||| || || ||||||||||||| || ||| | |||||| Sbjct 726915 GACAGCATCGACAACGTCAAGGCCAAGATCGAGGACAAGGAGGGCATCCCTGCGGACCAG 726974 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| |||||||| | | ||||| | ||||| || Sbjct 726975 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCTGCACCCTCTCGGACTACAAC 727034 Query 27586 GTCCAAAAGGAATCCACTCTTCATCT 27611 |||| ||||| || || || || || Sbjct 727035 ATCCAGAAGGAGTCGACGCTCCACCT 727060 >seq14 Length=726854 Score = 89.7 bits (98), Expect = 6e-13 Identities = 128/179 (72%), Gaps = 5/179 (3%) Strand=Plus/Plus Query 32031 GAAGAACCTG-TCGAGTGACATGA----AGGTGGCGCAGCTGTCGGGCTACGTGGCAGAG 32085 |||||| ||| ||| ||| ||| |||| | || || ||||| ||||| | ||| Sbjct 632120 GAAGAAGCTGATCGCGTGCGTTGAGAACAGGTCGGACAACTCTCGGGTTACGTTTCCGAG 632179 Query 32086 CAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAG 32145 || |||| || |||||||| || || ||||| ||||||||||| || || |||||| Sbjct 632180 CACTCGGCGTACCACCACGGAGACGCCTCGCTGCAGGGCACCATCATCGGTCTCGCTCAG 632239 Query 32146 AACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCG 32204 | || |||||| || ||| ||||| | ||||| || |||||||| || || || Sbjct 632240 CAGTTCGTCGGTAGCAACAACTTGAACGTCCTCGACCCCAACGGACAGTTCGGAACGCG 632298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309530276640