Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq6 96.9 3e-15 seq13 87.8 2e-12 seq25 82.4 7e-11 >seq6 Length=1242253 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27018 AAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATT 27077 ||| | || || || || || || |||||||| |||| || | || || || || Sbjct 238578 AAGACCATCACCCTCGAGGTCGAGTCGTCCGACACGATCGACAACGTTAAGGCCAAGATC 238637 Query 27078 CAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTG 27137 || ||||| || ||||| || ||||| || |||||||| || | ||||||||| || | Sbjct 238638 CAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTTTGATCTTCGCCGGCAAGCAGCTC 238697 Query 27138 GAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 || ||| | ||| | || || |||||||| || |||||||||||| | || | || Sbjct 238698 GAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTG 238757 Query 27198 TTGCGTTTGCGGGGTGGC 27215 | ||| | || |||||| Sbjct 238758 CTCCGTCTCCGTGGTGGC 238775 Score = 87.8 bits (96), Expect = 2e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 || || || ||||| || ||||| || ||||| || ||||| || || | ||||||||| Sbjct 237636 AAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCTTGATCTTCGCCGGCAAG 237695 Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191 || | || ||| | ||| |||| ||||||||||| || |||||||||||| | || Sbjct 237696 CAGCTCGAGGACGGCCGCACCCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTCCAC 237755 Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217 | || | ||| | || ||||| || Sbjct 237756 CTCGTGCTCCGTCTCCGTGGTGGAAT 237781 >seq13 Length=743395 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 || || || ||||| || || || || || ||||| |||||| | || | ||||||||| Sbjct 147122 AAGATCCAGGACAAGGAGGGAATTCCCCCTGATCAGCAGCGTCTCATCTTCGCCGGCAAG 147063 Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191 || | || ||| | ||| |||| || |||||||| || |||||||||||| | || Sbjct 147062 CAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTTCAC 147003 Query 27192 TTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| | ||| | || ||||| Sbjct 147002 TTGGTGCTTCGTCTCCGTGGTGG 146980 >seq25 Length=440178 Score = 82.4 bits (90), Expect = 7e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 || || || ||||| || || || || ||||| || |||||| | || | ||||||||| Sbjct 156379 AAGATCCAGGACAAGGAGGGAATTCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGCAAG 156438 Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191 || | || || | ||| |||| ||||||||||| || |||||||||||| | || Sbjct 156439 CAGCTCGAGGATGGCCGCACCCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTCCAC 156498 Query 27192 TTGGT 27196 ||||| Sbjct 156499 TTGGT 156503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917736749440