Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq6 140 8e-28 seq25 127 5e-24 seq1 120 7e-22 seq13 118 2e-21 seq21 114 3e-20 >seq6 Length=1242253 Score = 140 bits (154), Expect = 8e-28 Identities = 140/182 (77%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || |||||||| || ||||| || |||||||| || |||| ||||| | || || Sbjct 238759 AGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCC 238700 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| | || || ||||| ||||| | || ||||||||| Sbjct 238699 TCGAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 238640 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| ||||| || || |||||||| ||||| ||| Sbjct 238639 TGGATCTTGGCCTTAACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 238580 Query 211083 TT 211084 || Sbjct 238579 TT 238578 Score = 118 bits (130), Expect = 2e-21 Identities = 103/128 (80%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| ||||||| |||||| | || || Sbjct 237763 AGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCGTCC 237704 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| | ||| || ||||| ||||| | || ||||||||| Sbjct 237703 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 237644 Query 211023 TGGATCTT 211030 |||||||| Sbjct 237643 TGGATCTT 237636 >seq25 Length=440178 Score = 127 bits (140), Expect = 5e-24 Identities = 105/128 (82%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || || ||||| || |||||||| ||||||| |||||| | ||||| Sbjct 156506 AGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCC 156447 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || || || ||||| || |||| ||| ||||||||| Sbjct 156446 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCC 156387 Query 211023 TGGATCTT 211030 |||||||| Sbjct 156386 TGGATCTT 156379 >seq1 Length=1866479 Score = 120 bits (132), Expect = 7e-22 Identities = 134/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968 ||||| || || ||||| || |||||||| || |||| ||||| | || || || ||| Sbjct 727060 AGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCAGCCGTCCTCGAGC 727001 Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028 |||||||| |||||||| || || || ||||| | ||| | || |||||||||| |||| Sbjct 727000 TGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGCAGGGATGCCCTCCTTGTCCTCGATC 726941 Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCC 211087 || || ||||| |||||| |||| ||| | ||| ||| |||| |||||||| Sbjct 726940 TTGGCCTTGACGTTGTCGATGCTGTCGGAGGACACGACCGCGACGGTGAGGGTCTTTCC 726882 >seq13 Length=743395 Score = 118 bits (130), Expect = 2e-21 Identities = 103/128 (80%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||| || ||||| || |||||||| || |||| |||||| | || || Sbjct 146995 AGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 147054 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || || || || ||||| |||| ||| ||||||||| Sbjct 147055 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGAATTCCCTCCTTGTCC 147114 Query 211023 TGGATCTT 211030 |||||||| Sbjct 147115 TGGATCTT 147122 >seq21 Length=517387 Score = 114 bits (126), Expect = 3e-20 Identities = 180/258 (70%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 178120 GGCATCTTTGTACGCAATGAAGGGCATTCCCACCTCAGCTTGAGCCACGAGAATGTGATG 178179 ||| || ||||| |||||||| | || ||| | |||||| |||||||| | Sbjct 16420 GGCGTCCTTGTAGAGCATGAAGGGGTTACCGGTCTCGACCTGAGCCTCGAGAATGGCGTA 16479 Query 178180 CCAAAGCTCCTGGGCTCGGACAGTCTTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTA 178239 ||| |||| || || ||| ||||| ||||| || || ||||||||||| ||| | Sbjct 16480 CCACAGCTTTTGCGCGGGGATGGTCTTCTTGGCGCGACCCTCCTTCTCGTACTTGTTGAA 16539 Query 178240 GAGCTCCTCGAATTCCGGTCCATAGACATCATCGAGACCGGGAGCCTCATTGGGGCAGAA 178299 ||| ||| ||| || || || || || | ||| ||||||||||| ||||||||| Sbjct 16540 GAGAGCCTTGAACTCGTCGCCGTACACCTCGTGGAGTCCGGGAGCCTCGGCGGGGCAGAA 16599 Query 178300 GAGACTCCACTGACCGTCTTCCTTCACTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGC 178359 ||| ||| | ||| | |||| || || | |||||||||||| | |||||| ||| Sbjct 16600 GAGGGGCCAGTCGCCGGCCTCCTCGACACGCTCCATGAAGAGGTCGGGAATCCAGAGGGC 16659 Query 178360 ATAGAAAATCTCTCTGGC 178377 |||| | || ||||| Sbjct 16660 GAAGAAGAGATCCCTGGC 16677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159150188100530