Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq6 143 6e-29 seq13 113 9e-20 seq25 102 2e-16 seq1 102 2e-16 seq23 91.5 3e-13 >seq6 Length=1242253 Score = 143 bits (158), Expect = 6e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || || || || | || || || |||||||||||||| | Sbjct 238774 CCACCACGGAGACGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 238715 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| ||||| || || || ||||| ||||||||||| || ||||| || Sbjct 238714 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGAGGG 238655 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| || || ||| | ||||| ||||| || | ||||| Sbjct 238654 ATGCCCTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATCGTGTCGGACGACTCGACC 238595 Query 283053 TCGAGAGTGATCGTCTT 283069 ||||| ||||| ||||| Sbjct 238594 TCGAGGGTGATGGTCTT 238578 Score = 104 bits (114), Expect = 5e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || || || || | || || || ||||||||||| || | | Sbjct 237778 CCACCACGGAGACGGAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAA 237719 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| ||||| || || || ||||| |||||||| || || ||||| || Sbjct 237718 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGG 237659 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTAC 283024 || ||||||||||| |||||||| || || || Sbjct 237658 ATGCCCTCCTTGTCCTGGATCTTGGCCTTAAC 237627 >seq13 Length=743395 Score = 113 bits (124), Expect = 9e-20 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || ||||| |||| || | || || || |||||||||||||| | | Sbjct 146980 CCACCACGGAGACGAAGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 147039 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| ||||| || || || ||||| ||||| | ||| || || ||| ||| Sbjct 147040 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGA 147099 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTAC 283024 || ||||||||||| |||||||| || || || Sbjct 147100 ATTCCCTCCTTGTCCTGGATCTTGGCCTTGAC 147131 >seq25 Length=440178 Score = 102 bits (112), Expect = 2e-16 Identities = 92/116 (79%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || ||||||||||| || | ||| |||||||||||||| || || || ||||| ||| Sbjct 156485 TCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAG 156426 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTAC 283024 || | ||| || ||||| ||||| ||||||||||| |||||||| || || || Sbjct 156425 ATGAGACGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGAC 156370 >seq1 Length=1866479 Score = 102 bits (112), Expect = 2e-16 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || |||||||||||||| | || |||| ||| ||||| || || || ||||| ||| Sbjct 727045 TCCTTCTGGATGTTGTAGTCCGAGAGGGTGCAGCCGTCCTCGAGCTGCTTGCCGGCGAAG 726986 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | ||| || ||||| | || || ||||||||||| | |||||| || || ||| | Sbjct 726985 ATGAGACGCTGCTGGTCCGCAGGGATGCCCTCCTTGTCCTCGATCTTGGCCTTGACGTTG 726926 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACC 283072 ||||| |||| || | |||| ||| |||| ||||| || Sbjct 726925 TCGATGCTGTCGGAGGACACGACCGCGACGGTGAGGGTCTTTCC 726882 >seq23 Length=479327 Score = 91.5 bits (100), Expect = 3e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 316182 ATAACGCCATTGGATGTACTGATTGGGCGTCATGTCAAGATGATCCTCGATGTGGTGGAA 316241 ||||||||| ||||||||||| ||| ||| | || || || ||||||||||||||||| Sbjct 17822 ATAACGCCACTGGATGTACTGCATGGCGGTCTTCTCGAGGTGCTCCTCGATGTGGTGGAA 17763 Query 316242 AGCGTGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTC 316284 |||||||| || ||||| || | ||| | || || |||||| Sbjct 17762 GGCGTGCTGGGCGACGTAGGCGACACGAAGGTTGGGGTGCTTC 17720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046737563815788