Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq6 107 1e-18 seq1 91.5 1e-13 seq13 84.2 2e-11 >seq6 Length=1242253 Score = 107 bits (118), Expect = 1e-18 Identities = 134/181 (74%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| |||||||| || |||||| ||||||||||| || | ||| ||| |||| || Sbjct 238757 CACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTC 238698 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| ||||||||||||||||| || | ||| | || ||||| ||| Sbjct 238697 GAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTG 238638 Query 44248 TATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| || | || ||| | || ||||||| || || ||||| | || || |||| Sbjct 238637 GATCTT-GGCCTTAACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCT 238579 Query 44307 T 44307 | Sbjct 238578 T 238578 Score = 89.7 bits (98), Expect = 4e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | || | | ||| ||||| || || |||||| |||||||||||||| Sbjct 237782 CATTCCACCACGGAGACGGAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATC 237723 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| |||| || |||||||| ||||| |||||||| |||||||| || | Sbjct 237722 CGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGG 237663 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTT 44253 ||| | || ||||| ||| ||||| Sbjct 237662 AGGGATGCCCTCCTTGTCCTGGATCTT 237636 >seq1 Length=1866479 Score = 91.5 bits (100), Expect = 1e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 44131 CAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAG 44190 |||||| ||||| |||||| ||||||||||| || | ||| || |||| || || Sbjct 727061 CAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCAGCCGTCCTCGAG 727002 Query 44191 CTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTAT 44250 |||||| ||||| ||||| | ||||||||| || | ||| | || ||||| ||| || Sbjct 727001 CTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGCAGGGATGCCCTCCTTGTCCTCGAT 726942 Query 44251 CTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCC 44310 ||| ||| | | | ||| |||||| ||| | ||| | || || | |||||||| Sbjct 726941 CTTGGCCTTGACGTTGTCGATGCTGTCGGAGGACACGACCGCGACGGTGAGGGTCTTTCC 726882 Query 44311 CGTGAGGG 44318 ||| || Sbjct 726881 GTTGAAGG 726874 >seq13 Length=743395 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| |||||| || |||||| ||||||||||| || | || ||| |||| || Sbjct 146997 CACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTC 147056 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| ||||| | |||||||||||| | || | || ||||| ||| Sbjct 147057 GAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGAATTCCCTCCTTGTCCTG 147116 Query 44248 TATCTT 44253 ||||| Sbjct 147117 GATCTT 147122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989864739274