Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq6 116 9e-21 seq1 111 4e-19 seq25 98.7 2e-15 seq13 86.0 2e-11 >seq6 Length=1242253 Score = 116 bits (128), Expect = 9e-21 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 177951 AAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATT 178010 || || |||||||||||||| || || ||||| ||||| ||||| || ||||| Sbjct 238578 AAGACCATCACCCTCGAGGTCGAGTCGTCCGACACGATCGACAACGTTAAGGCCAAGATC 238637 Query 178011 CAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTC 178070 |||||||| || || |||||||| |||||||| || | ||||||||||| || |||||| Sbjct 238638 CAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTTTGATCTTCGCCGGCAAGCAGCTC 238697 Query 178071 GAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 || || || | || || | || || ||| |||| || || || || || || || || Sbjct 238698 GAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGT 238756 Score = 95.1 bits (104), Expect = 3e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| |||||||| || || |||||||| |||||||| || | ||||||||||| || Sbjct 237636 AAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCTTGATCTTCGCCGGCAAG 237695 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 |||||||| || || | || ||| | ||||| ||| |||| || || || || || || Sbjct 237696 CAGCTCGAGGACGGCCGCACCCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTCCAC 237755 Query 178125 CTTGT 178129 || || Sbjct 237756 CTCGT 237760 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 177942 CTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAA 178001 ||||| || || || |||||||||||||| || || ||||| ||||| ||||| || Sbjct 237894 CTCACTGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACGATCGACAACGTTAAG 237953 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 ||||| |||||||| || || |||||||| |||||||| || Sbjct 237954 GCCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCG 237997 >seq1 Length=1866479 Score = 111 bits (122), Expect = 4e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 177948 GGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAG 178007 ||||| || ||||| ||| ||| | ||| |||| |||||| |||||||| ||| Sbjct 726882 GGAAAGACCCTCACCGTCGCGGTCGTGTCCTCCGACAGCATCGACAACGTCAAGGCCAAG 726941 Query 178008 ATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAG 178067 || ||||||| || || |||||| |||||||||| || || ||||||||||| || ||| Sbjct 726942 ATCGAGGACAAGGAGGGCATCCCTGCGGACCAGCAGCGTCTCATCTTCGCCGGCAAGCAG 727001 Query 178068 CTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCT 178126 ||||| || || | || || | || || ||| |||| || || || || || || || Sbjct 727002 CTCGAGGACGGCTGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACGCTCCACCT 727060 >seq25 Length=440178 Score = 98.7 bits (108), Expect = 2e-15 Identities = 97/124 (78%), Gaps = 1/124 (1%) Strand=Plus/Plus Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| |||||||| || ||||| || || |||||||| || || ||||||||||| || Sbjct 156379 AAGATCCAGGACAAGGAGGGAATTCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGCAAG 156438 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 |||||||| ||||| | || ||| | ||||| ||| |||| || || || || || || Sbjct 156439 CAGCTCGAGGATGGCCGCACCCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTCCA- 156497 Query 178125 CTTG 178128 |||| Sbjct 156498 CTTG 156501 >seq13 Length=743395 Score = 86.0 bits (94), Expect = 2e-11 Identities = 94/124 (76%), Gaps = 1/124 (1%) Strand=Plus/Minus Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| |||||||| || ||||| || || || ||||| || || ||||||||||| || Sbjct 147122 AAGATCCAGGACAAGGAGGGAATTCCCCCTGATCAGCAGCGTCTCATCTTCGCCGGCAAG 147063 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 |||||||| || || | || ||| | || || ||| |||| || || || || || || Sbjct 147062 CAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTTCA- 147004 Query 178125 CTTG 178128 |||| Sbjct 147003 CTTG 147000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203729318417668