Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq6 127 2e-24 seq1 118 1e-21 seq13 114 1e-20 seq25 100 3e-16 >seq6 Length=1242253 Score = 127 bits (140), Expect = 2e-24 Identities = 140/184 (76%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | ||| || || || || ||||||||| ||||| ||||| || Sbjct 238775 GCCACCACGGAGACGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 238716 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||||||| |||| |||||||||||||||||||| |||| ||||| ||||| | || Sbjct 238715 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGAGG 238656 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || |||||||||| || | || || | |||| | | | |||||| |||||| | Sbjct 238655 GATGCCCTCCTTGTCC-TGGATCTTGGCCTTAACGTTGTCGATCGTGTCGGACGACTCGA 238597 Query 41814 CCTC 41817 |||| Sbjct 238596 CCTC 238593 Score = 114 bits (126), Expect = 1e-20 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| || || || || ||||||||| ||||| || || || Sbjct 237778 CCACCACGGAGACGGAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAA 237719 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| |||||||||||||||||||| |||| |||||| ||||| | || Sbjct 237718 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGG 237659 Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778 | || |||||||||| ||| || Sbjct 237658 ATGCCCTCCTTGTCCTGGATCTT 237636 >seq1 Length=1866479 Score = 118 bits (130), Expect = 1e-21 Identities = 100/123 (81%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 41656 CAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAG 41715 ||| || ||||| ||||||||| ||||| ||||| |||||||||| |||| ||||| Sbjct 727061 CAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCAGCCGTCCTCGAG 727002 Query 41716 CTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGAT 41775 ||||||||||||||| || || ||||| |||||||| || | || |||||||||| ||| Sbjct 727001 CTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGCAGGGATGCCCTCCTTGTCCTCGAT 726942 Query 41776 TTT 41778 || Sbjct 726941 CTT 726939 >seq13 Length=743395 Score = 114 bits (126), Expect = 1e-20 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || || || ||||||||| ||||| ||||| || Sbjct 146980 CCACCACGGAGACGAAGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 147039 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| |||||||||||||||||||| || || ||||| || || | |||| Sbjct 147040 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGA 147099 Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778 | | |||||||||| ||| || Sbjct 147100 ATTCCCTCCTTGTCCTGGATCTT 147122 >seq25 Length=440178 Score = 100 bits (110), Expect = 3e-16 Identities = 87/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||| ||||| || || || |||||||| | || |||||||||||||||||||| Sbjct 156486 CTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 156427 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTT 41778 || || ||||| ||||| | ||||| | |||||||||| ||| || Sbjct 156426 GATGAGACGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGATCTT 156379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303294986400