Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F002105055.1_202017 -04-20] 177 sequences; 26,329,764 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq161 179 4e-40 seq136 129 6e-25 seq10 114 1e-20 seq102 107 2e-18 seq139 102 8e-17 >seq161 Length=98600 Score = 179 bits (198), Expect = 4e-40 Identities = 179/230 (78%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 116640 GGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCA 116699 |||||| |||||| ||||||||||| || |||||||||| |||||| ||||||| |||| Sbjct 27864 GGCGCA-GTACAAGAAGGCCGAGGCTTCCTTCTGGACCGCTGAGGAGATGGACCTTTCCA 27922 Query 116700 AGGACACGAGCGACTGGGAGCGCTTG---AACGACAACGAGCGCCATTTCATCAAGCACG 116756 |||| | | ||||||||| | | || || |||||||| | |||||| |||||| Sbjct 27923 AGGATATGCACGACTGGGACAACAAGCTCAAGGAGGACGAGCGCTACTTCATCCAGCACG 27982 Query 116757 TGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCG 116816 | || ||||| |||||||| ||| || |||||||||||||| || ||||||||||| Sbjct 27983 TCCTCGCCTTCTTCGCCGCTTCCGATGGTATCGTCAACGAGAACCTCCTCGAGCGTTTCT 28042 Query 116817 CTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATC 116866 | ||||| ||| |||||||| || ||||||||||| || || ||| Sbjct 28043 CGTCCGAGGTTCAGTGCGCCGAGGCTCGTTGCTTCTACGGATTCCAAATC 28092 Score = 132 bits (146), Expect = 5e-26 Identities = 240/346 (69%), Gaps = 4/346 (1%) Strand=Plus/Plus Query 117086 TTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAAC 117145 |||||| |||| || ||||||||||| ||||| ||||||||||| || || ||| |||| Sbjct 28504 TTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGACTCATGCCCGGACTCACCTTCTCCAAC 28563 Query 117146 GAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCAT 117205 ||||||||||| | |||||||| || || |||||| ||||| | ||||| || Sbjct 28564 GAGCTCATCTCGCGCGACGAGGGACTTCACACCGACTTCGCCTGCCTCATGTTCTCCCAC 28623 Query 117206 TTGGTGCAGCGACC-GAGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCAT 117264 | | || || || | | || | | |||| | |||| ||| || || |||| || Sbjct 28624 CTCGAGCGTCGTCCTCACCCCGACAC-CGTCGAGATGATCATCAAGGAGGCCGTCGAGAT 28682 Query 117265 CGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC 117324 ||| || ||||||||||| || || || || || | ||| | || || | | Sbjct 28683 TGAGAAGGAGTTCCTCACCGAGGCCCTCCCCGTCTCCCTCATCGGAATGAA-CGCCACCC 28741 Query 117325 -GATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCA 117383 |||| || ||||||||||||||||||||| | || || || || | | ||| Sbjct 28742 TCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTTCTCGTCTCCCTCGGTAACCCCA 28801 Query 117384 AGCACTACAACACGCCCAACCCGCTGGACTTTATGAACCTCATCTC 117429 || |||||| ||||| | ||||| |||||||||||||| Sbjct 28802 AGGTCTACAAGGTCGAGAACCCCTTCGACTTCATGAACCTCATCTC 28847 >seq136 Length=130718 Score = 129 bits (142), Expect = 6e-25 Identities = 147/195 (75%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 40705 AAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AAC 40763 ||| | ||||| ||||| ||||||||| |||| || || | |||||| | | | ||| Sbjct 72665 AAAGCCCTCACTGGCAAGACCATCACCCTCGAGGTTGAGTCGTCCGACACCATCGACAAC 72606 Query 40764 GCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTA 40823 | |||||| || || | ||||| ||||| ||||| | |||||||| || | |||| Sbjct 72605 G-TCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCTTGATCTT 72547 Query 40824 CGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGC 40883 ||| ||||| ||||| || |||| ||||||||| ||||||||||||||||||||| | Sbjct 72546 CGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTC 72487 Query 40884 CACGCTGCATCTAGT 40898 || || || || || Sbjct 72486 GACTCTTCACCTCGT 72472 Score = 127 bits (140), Expect = 2e-24 Identities = 143/189 (76%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 40711 CTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAA 40769 ||||| || || ||||||||| |||| ||||| | |||||| | | | |||| |||| Sbjct 71410 CTCACCGGAAAGACCATCACCCTCGAGGTCGAGTCTTCCGACACCATCGACAACG-TCAA 71352 Query 40770 GGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGG 40829 || || || | ||||| ||||| ||||| | |||||||| || | |||| ||| || Sbjct 71351 GGCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCTTGATCTTCGCCGG 71292 Query 40830 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCT 40889 ||| ||||| || |||| ||||||||| ||||||||||||||||||||| | || || Sbjct 71291 CAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACTCT 71232 Query 40890 GCATCTAGT 40898 || || || Sbjct 71231 TCACCTCGT 71223 Score = 127 bits (140), Expect = 2e-24 Identities = 143/189 (76%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 40711 CTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAA 40769 ||||| || || ||||||||| |||| ||||| | |||||| | | | |||| |||| Sbjct 72344 CTCACTGGAAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACCATCGACAACG-TCAA 72286 Query 40770 GGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGG 40829 || || || | ||||| ||||| ||||| | |||||||| || | |||| ||| || Sbjct 72285 GGCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCTTGATCTTCGCCGG 72226 Query 40830 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCT 40889 ||| ||||| || |||| ||||||||| ||||||||||||||||||||| | || || Sbjct 72225 CAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACCCT 72166 Query 40890 GCATCTAGT 40898 || || || Sbjct 72165 CCACCTCGT 72157 Score = 118 bits (130), Expect = 1e-21 Identities = 141/189 (75%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 40711 CTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAA 40769 ||||| || || ||||||||| |||| ||||| | |||||| | | | |||| |||| Sbjct 71721 CTCACTGGAAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACCATCGACAACG-TCAA 71663 Query 40770 GGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGG 40829 || || || | ||||| ||||| ||||| | |||||||| || | |||| ||| || Sbjct 71662 GGCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCTTGATCTTCGCCGG 71603 Query 40830 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCT 40889 ||| ||||| || |||| || ||||| ||||||||||||||||||||| | || || Sbjct 71602 CAAGCAGCTCGAGGACGGCCGTACCCTTTCGGACTACAACATCCAGAAGGAGTCGACTCT 71543 Query 40890 GCATCTAGT 40898 || || || Sbjct 71542 TCACCTCGT 71534 Score = 113 bits (124), Expect = 5e-20 Identities = 140/189 (74%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 40711 CTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAA 40769 ||||| || || ||||||||| |||| ||||| | |||||| | | | |||| |||| Sbjct 72034 CTCACTGGAAAGACCATCACCCTCGAGGTCGAGTCTTCCGACACCATCGACAACG-TCAA 71976 Query 40770 GGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGG 40829 | || || | ||||| ||||| ||||| | |||||||| || | |||| ||| || Sbjct 71975 AGCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCTTGATCTTCGCCGG 71916 Query 40830 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCT 40889 ||| ||||| || |||| || ||||| ||||||||||||||||||||| | || || Sbjct 71915 CAAGCAGCTCGAGGACGGCCGTACCCTTTCGGACTACAACATCCAGAAGGAGTCGACTCT 71856 Query 40890 GCATCTAGT 40898 || || || Sbjct 71855 TCACCTCGT 71847 Score = 100 bits (110), Expect = 3e-16 Identities = 102/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 40766 TCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACG 40825 |||||| || || | ||||| ||||| ||||| | |||||||| || | |||| || Sbjct 72918 TCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCTTGATCTTCG 72859 Query 40826 CGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCA 40885 | ||||| ||||| || |||| ||||||||| ||||||||||||||||||||| | | Sbjct 72858 CCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGA 72799 Query 40886 CGCTGCATCTAGT 40898 | || || || || Sbjct 72798 CCCTCCACCTCGT 72786 >seq10 Length=56356 Score = 114 bits (126), Expect = 1e-20 Identities = 105/133 (79%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 40766 TCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACG 40825 |||||| || || | ||||| ||||| |||||| | ||||||||||| ||||||| || Sbjct 7618 TCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAGCAACGTCTCATCTTCG 7677 Query 40826 CGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCA 40885 | ||||| ||||| || |||| |||||||| ||||||||||||||||||||| | | Sbjct 7678 CCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGA 7737 Query 40886 CGCTGCATCTAGT 40898 | || || || || Sbjct 7738 CCCTTCACCTTGT 7750 >seq102 Length=284969 Score = 107 bits (118), Expect = 2e-18 Identities = 169/236 (72%), Gaps = 7/236 (3%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || ||| ||||||||| | ||| | || ||||||||||| | |||||| | || || Sbjct 75491 ATCTGGGCCATGTACAAGAGGGCGCAAGCATCGTTCTGGACGGCAGAGGAGATTGATCTA 75550 Query 116696 TCCAAGGACACGAG-CGACTGGGAGCGCTTG---AACGACAACGAGCGCCATTTCATCAA 116751 | ||| | || ||| ||| | | | | |||||| |||||||| | ||| | Sbjct 75551 GGCGGCGAC-CTAGTCGATTGGCATCACCGGCTCAACGACGACGAGCGCTACTTCGTTTC 75609 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAG-C 116810 ||| || || ||||| ||| | || || ||||||||||| ||||| |||| ||| Sbjct 75610 GCATGTCCTTGCCTTCTTCTCGGCGTCGGATGGCATCGTCAATGAGAACTTGGTGGAGAG 75669 Query 116811 GTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATC 116866 |||| |||| |||||||||| || |||||| || ||||||| || ||||||||| Sbjct 75670 GTTTAGCTC-GGAGGTGCAGTGCGCTGAGGCGAGGAGCTTCTATGGGTTTCAGATC 75724 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/106 (79%), Gaps = 4/106 (4%) Strand=Plus/Plus Query 117086 TTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGC--CTGACTTTCAGCA 117143 |||||| | |||||||||||||| || ||||| || ||||||||| ||| |||| || Sbjct 76141 TTCGCCTCAATATTTTGGCTCAAAAAGCGCGGTCTAATGCCCGGCCTCTGCTTTTC--CA 76198 Query 117144 ACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTG 117189 ||||||||||||| ||||||| || || ||| ||| || || || Sbjct 76199 ACGAGCTCATCTCGCGGGACGAAGGCCTTCATACCGATTTCGCTTG 76244 >seq139 Length=125316 Score = 102 bits (112), Expect = 8e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 40766 TCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACG 40825 |||||| || || | ||||| ||||| |||||| | || ||||| || ||||||| || Sbjct 15504 TCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGATCAGCAGCGTCTCATCTTCG 15445 Query 40826 CGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCA 40885 | || || ||||| || |||| |||||||| ||||||||||||||||||||| | | Sbjct 15444 CTGGAAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGA 15385 Query 40886 CGCTGCATCTAGTG 40899 | || || || ||| Sbjct 15384 CTCTTCACCTTGTG 15371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218060077520