Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F002105055.1_202017 -04-20] 177 sequences; 26,329,764 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq139 95.1 1e-14 seq136 87.8 2e-12 >seq139 Length=125316 Score = 95.1 bits (104), Expect = 1e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | || ||||| || || |||||||| || | ||||| ||||| Sbjct 15371 CACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTC 15430 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 |||||| ||||||||| ||||||||||||||||||| || || || ||||||||||| Sbjct 15431 GAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCAGGGGGGATTCCCTCCTTGTC 15487 >seq136 Length=130718 Score = 87.8 bits (96), Expect = 2e-12 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||| || | ||||| ||||||||||| || || Sbjct 71235 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 71294 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| | |||||||| |||||||| || ||||||||||| || || || Sbjct 71295 GCGAAGATCAAGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTG 71354 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAG 118717 || | |||| |||||| | ||||||||||| ||| | || || ||||| || Sbjct 71355 ACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGGGTGATGGTCTTTCCGGTGAG 71410 Score = 87.8 bits (96), Expect = 2e-12 Identities = 129/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| || | ||||| ||||||||||| Sbjct 72162 GTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTG 72221 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||| | |||||||| |||||||| || ||||||||||| || || Sbjct 72222 CTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCCTGGATCTT 72281 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| |||||| | ||||||||||| ||| | || || || || Sbjct 72282 GGCCTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTTCCAGT 72341 Query 118715 CAG 118717 || Sbjct 72342 GAG 72344 Score = 86.0 bits (94), Expect = 5e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||| || | ||||| ||||||||||| || || Sbjct 72484 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 72543 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| | |||||||| |||||||| || ||||||||||| || || || Sbjct 72544 GCGAAGATCAAGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTG 72603 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| |||||| | ||| ||||||| ||| | || ||||| || || | | Sbjct 72604 ACGTTGTCGATGGTGTCGGACGACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGGGCT 72663 Query 118722 TT 118723 || Sbjct 72664 TT 72665 Score = 84.2 bits (92), Expect = 2e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||| || | || || ||||||||||| || || Sbjct 71859 GTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCGTCCTCGAGCTGCTTGCCG 71918 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| | |||||||| |||||||| || ||||||||||| || || ||| Sbjct 71919 GCGAAGATCAAGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCCTGGATCTTGGCTTTG 71978 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAG 118717 || | |||| |||||| | ||||||||||| ||| | || || || || || Sbjct 71979 ACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGGGTGATGGTCTTTCCAGTGAG 72034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829464146484