Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F002105055.1_202017 -04-20] 177 sequences; 26,329,764 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq91 206 2e-48 seq161 100 3e-16 seq136 84.2 2e-11 seq102 82.4 7e-11 >seq91 Length=350055 Score = 206 bits (228), Expect = 2e-48 Identities = 366/530 (69%), Gaps = 8/530 (2%) Strand=Plus/Minus Query 23353 CATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTT 23412 ||| || || || || ||||| || ||| |||| || || | ||||| |||||||| || Sbjct 141223 CATGAAGAGGTCGGGAATCCAAAGGGCGAAGAAGAGATCCCTAGCGCGAACCTCCTCCTT 141164 Query 23413 GCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTA 23472 |||| |||||| | || | || || || | ||| || ||||| ||||||||||| Sbjct 141163 GCCGTGGTTCTTGCGGAGGTCGAGGAACTCGAAGATGTCGGCGTGCCAGGGCTCGAGGTA 141104 Query 23473 AACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTT 23532 | || || || || || | ||| ||||| ||||| |||||||| || || |||||||| Sbjct 141103 GATTGCGAAGGCTCCGGGGCGCTTGTTGCCTCCCTGGTCGACGTAGCGAGCGGTGTTGTT 141044 Query 23533 GTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACG--CCCGCCACACTC 23590 ||| || | ||||| || | || ||||| || |||| | || || || | Sbjct 141043 GTAGACGCGAAGCATGGGGATGATGCCGTTCGAGTAGCCG--TTCGTTCCGGCGATGTAG 140986 Query 23591 GAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATC 23650 || || | || || | |||||| | | || || || |||||| | | || || || Sbjct 140985 GAGCCAGTCGCGCGGATGTTGTGGATGCTGAGTCCGATTCCTCCGGCGGTCTTGGAGATG 140926 Query 23651 ATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACC 23710 | ||||| || || ||||||||||||||||||||| || || || | | ||| Sbjct 140925 AGGGCGCACGTCTTGAGGGTGTCGTAGATGCCCTCGATGGAATCGTCCTTCATGGTGACG 140866 Query 23711 AAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCG 23770 | ||| ||||| || | || | | || || |||| ||| || ||||| |||| Sbjct 140865 AGGAAGCACGACGAGAGCTGAGGGTGAGGGGTTCCGGCGTTGAAGAGGGTCGGCGAGGCG 140806 Query 23771 TGCGTAAAGTATCCATTCGACATTAGATTGTACG--TGTCGATGGCGGCATCAATGTCCT 23828 || || ||||| | | |||||| || ||||||| || || ||| |||||||||| Sbjct 140805 TGGGTGAAGTAGCGCTCCGACATGAGGTTGTACGACTGCAGAACGCG--ATCAATGTCCG 140748 Query 23829 CTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG 23878 ||||| || |||| ||||| ||||| | ||||| ||||||| |||| Sbjct 140747 AGCCGTGGATTCCGACAGCGACACGCATGAGCATGTGCTGAGGTCGCTCG 140698 >seq161 Length=98600 Score = 100 bits (110), Expect = 3e-16 Identities = 185/270 (69%), Gaps = 6/270 (2%) Strand=Plus/Plus Query 58029 ATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATA 58088 || || ||| | ||||| ||||| || |||||||| || || || ||||||| | || Sbjct 28513 ATCTTCTGGCTCAAGAAGCGCGGACTCATGCCCGGACTCACCTTCTCCAACGAGCTCATC 28572 Query 58089 TCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAAT 58148 |||||||||||||| || || || || || || ||||| |||| ||| ||| | | | Sbjct 28573 TCGCGCGACGAGGGACTTCACACCGACTTCGCCTGCCTCATGTTCTCCCACCTCGAGCGT 28632 Query 58149 AAACCGACGCGGGATCGCATCTTGGACATTATCACC---GAGGCGGTCGCGATCGAAAAT 58205 || | || || | | || || |||| | ||||| |||| ||| || || Sbjct 28633 CGTCCTCACCCCGA---CACCGTCGAGATGATCATCAAGGAGGCCGTCGAGATTGAGAAG 28689 Query 58206 GAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCA 58265 ||||| ||||||| ||||| || || || | |||| |||||| | |||| Sbjct 28690 GAGTTCCTCACCGAGGCCCTCCCCGTCTCCCTCATCGGAATGAACGCCACCCTCATGTGC 28749 Query 58266 AAGTACATTGAGTTTGTTGCCGACAGACTT 58295 ||||||| ||||| || |||||| | ||| Sbjct 28750 CAGTACATCGAGTTCGTCGCCGACCGCCTT 28779 Score = 84.2 bits (92), Expect = 2e-11 Identities = 153/221 (69%), Gaps = 5/221 (2%) Strand=Plus/Plus Query 57581 GTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCT 57640 |||||| ||||| || || || || ||||||| || || | ||||| || |||||| | Sbjct 27870 GTACAAGAAGGCCGAGGCTTCCTTCTGGACCGCTGAGGAGATGGACCTTTCCAAGGATAT 27929 Query 57641 GAGCGATTGGGATTCC---CTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGC 57697 | ||| ||||| | ||||| || ||| | | || || | ||||| | || Sbjct 27930 GCACGACTGGGACAACAAGCTCAAGGAGGACGAGCGCTACTTCATCCAGCACGTCCTCGC 27989 Query 57698 GTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGA 57757 || |||||||| ||||||||||| || |||||||| | |||| | || || || Sbjct 27990 CTTCTTCGCCGCTTCCGATGGTATCGTCAACGAGAACCTCCTCGAGCGTTTCTCGTCCGA 28049 Query 57758 AGTGCAAGTG-ACGGAGGCGAGATGCTTTTACGGATTTCAA 57797 || | |||| | ||||| | ||||| |||||||| ||| Sbjct 28050 GGTTC-AGTGCGCCGAGGCTCGTTGCTTCTACGGATTCCAA 28089 >seq136 Length=130718 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 31214 CTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAA 31273 || || ||||| || |||||| |||| ||||| ||||||||| |||| | ||||| Sbjct 72659 CTCACTGGCAAGACCATCACCCTCGAGGTTGAGTCGTCCGACACCATCGACAACGTCAAG 72600 Query 31274 CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGC 31333 | || ||||||||| || | || |||||||||||||| | || ||||| ||| Sbjct 72599 GCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCTTGATCTTCGCCGGC 72540 Query 31334 AAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTT 31393 || ||| | || ||| || | || || ||||| || || || ||||||||| Sbjct 72539 AAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACTCTT 72480 Query 31394 CATCTGGTACT 31404 || || || || Sbjct 72479 CACCTCGTTCT 72469 >seq102 Length=284969 Score = 82.4 bits (90), Expect = 7e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 58019 CTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAA 58078 ||| || ||||||||||| | || || ||||| || ||||||||||| ||| ||| Sbjct 76140 CTTCGCCTCAATATTTTGGCTCAAAAAGCGCGGTCTAATGCCCGGCCTCTGCTTTTCCAA 76199 Query 58079 CGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCT 58126 |||| | || ||||| ||||| || || ||||| ||||| || ||||| Sbjct 76200 CGAGCTCATCTCGCGGGACGAAGGCCTTCATACCGATTTCGCTTGCCT 76247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765413741840