Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F002105055.1_202017 -04-20] 177 sequences; 26,329,764 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq132 132 8e-27 seq11 132 8e-27 seq116 123 4e-24 >seq132 Length=144945 Score = 132 bits (146), Expect = 8e-27 Identities = 102/121 (84%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 || |||||||| |||||||||||||| || ||||| ||||| |||||||||||||| ||| Sbjct 2970 GACAACATCCAGGGAATCACCAAGCCTGCCATCCGCCGTCTCGCTCGTCGTGGTGGTGTC 2911 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 |||||| |||| ||| | |||| || |||| ||||| |||| | |||||||||||| || Sbjct 2910 AAGCGTATCTCGGGACTCATCTACGAGGAGACTCGTGGTGTTCTCAAGATCTTCCTCGAG 2851 Query 16580 A 16580 | Sbjct 2850 A 2850 >seq11 Length=55947 Score = 132 bits (146), Expect = 8e-27 Identities = 102/121 (84%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 || |||||||| |||||||||||||| || ||||| ||||| |||||||||||||| ||| Sbjct 20453 GACAACATCCAGGGAATCACCAAGCCTGCCATCCGCCGTCTCGCTCGTCGTGGTGGTGTC 20394 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 |||||| |||| ||| | |||| || |||| ||||| |||| | |||||||||||| || Sbjct 20393 AAGCGTATCTCGGGACTCATCTACGAGGAGACTCGTGGTGTTCTCAAGATCTTCCTCGAG 20334 Query 16580 A 16580 | Sbjct 20333 A 20333 >seq116 Length=201274 Score = 123 bits (136), Expect = 4e-24 Identities = 100/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 || ||||| || || ||||||||||| |||||||| ||||| |||||||||||||| ||| Sbjct 9794 GACAACATTCAGGGTATCACCAAGCCTGCTATCCGCCGTCTCGCTCGTCGTGGTGGTGTC 9853 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 |||||| |||| ||| | |||| || |||| |||| |||| | |||||||||||| || Sbjct 9854 AAGCGTATCTCGGGACTCATCTACGAGGAGACCCGTGGTGTTCTCAAGATCTTCCTCGAG 9913 Query 16580 A 16580 | Sbjct 9914 A 9914 Score = 123 bits (136), Expect = 4e-24 Identities = 100/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 || ||||| || || ||||||||||| |||||||| ||||| |||||||||||||| ||| Sbjct 58687 GACAACATTCAGGGTATCACCAAGCCTGCTATCCGCCGTCTCGCTCGTCGTGGTGGTGTC 58628 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 |||||| |||| ||| | |||| || |||| |||| |||| | |||||||||||| || Sbjct 58627 AAGCGTATCTCGGGACTCATCTACGAGGAGACCCGTGGTGTTCTCAAGATCTTCCTCGAG 58568 Query 16580 A 16580 | Sbjct 58567 A 58567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075038167661