Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F002105055.1_202017 -04-20] 177 sequences; 26,329,764 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq91 140 4e-28 seq161 89.7 6e-13 seq102 82.4 1e-10 >seq91 Length=350055 Score = 140 bits (154), Expect = 4e-28 Identities = 359/544 (66%), Gaps = 2/544 (0%) Strand=Plus/Minus Query 63216 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGT 63275 || || | ||| ||||| || ||||||||||| || | || ||||| || | | | Sbjct 141231 ACACGCTCCATGAAGAGGTCGGGAATCCAAAGGGCGAAGAAGAGATCCCTAGCGCGAACC 141172 Query 63276 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 63335 ||||| || || ||||| || ||||||||| | | || || | ||||| || Sbjct 141171 TCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCGAAGATGTCGGCGTGCCAGGGC 141112 Query 63336 TCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 63395 || | ||| || || | |||| || || ||||| |||||||| || | ||| | |||| Sbjct 141111 TCGAGGTAGATTGCGAAGGCTCCGGGGCGCTTGTTGCCTCCCTGGTCGACGTAGCGAGCG 141052 Query 63396 GTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAG 63455 ||||| || || || | | ||| || || || ||||| || || || || |||| | Sbjct 141051 GTGTTGTTGTAGACGCGAAGCATGGGGATGATGCCGTTCGAGTAGCCGTTCGTTCCGGCG 140992 Query 63456 ATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTA 63515 || ||| ||| | || || || || || || || ||||| || || | || Sbjct 140991 ATGTAGGAGCCAGTCGCGCGGATGTTGTGGATGCTGAGTCCGATTCCTCCGGCGGTCTTG 140932 Query 63516 GAGATTAATGCGCATCGT-TTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCAT 63574 ||||| | ||||| ||| || | ||||| ||||| ||||| ||| ||| || |||| Sbjct 140931 GAGATGAGGGCGCA-CGTCTTGAGGGTGTCGTAGATGCCCTCGATGGAATCGTCCTTCAT 140873 Query 63575 GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGG 63634 | | | || || || || | || | || ||||| || || || | ||| || Sbjct 140872 GGTGACGAGGAAGCACGACGAGAGCTGAGGGTGAGGGGTTCCGGCGTTGAAGAGGGTCGG 140813 Query 63635 AGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT 63694 || ||||| || || | || || | || ||||||| || | | | || || Sbjct 140812 CGAGGCGTGGGTGAAGTAGCGCTCCGACATGAGGTTGTACGACTGCAGAACGCGATCAAT 140753 Query 63695 ATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGAT 63754 ||| | || ||||| || ||||||||||| | |||||||||||||| || ||| Sbjct 140752 GTCCGAGCCGTGGATTCCGACAGCGACACGCATGAGCATGTGCTGAGGTCGCTCGGCGAC 140693 Query 63755 CTTG 63758 |||| Sbjct 140692 CTTG 140689 >seq161 Length=98600 Score = 89.7 bits (98), Expect = 6e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 ||||| | || ||||| ||| ||| || |||||||| | || || |||||||| Sbjct 28616 AACATGAGGCAGGCGAAGTCGGTGTGAAGTCCCTCGTCGCGCGAGATGAGCTCGTTGGAG 28557 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCC 33413 || |||||||||||||| || || ||||| || ||||| || ||||| ||||| ||||| Sbjct 28556 AAGGTGAGTCCGGGCATGAGTCCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGATCC 28498 >seq102 Length=284969 Score = 82.4 bits (90), Expect = 1e-10 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || ||||||||| || || || ||||| | || || ||||||||||| ||| Sbjct 76244 CAAGCGAAATCGGTATGAAGGCCTTCGTCCCGCGAGATGAGCTCGTTGGAAAAGCAGAGG 76185 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCC 33413 ||||||||||| || |||||||| ||||||||||| || ||||| || || Sbjct 76184 CCGGGCATTAGACCGCGCTTTTTGAGCCAAAATATTGAGGCGAAGGAGCC 76135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622945821729320