Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F002105055.1_202017 -04-20] 177 sequences; 26,329,764 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq173 114 3e-20 seq140 114 3e-20 seq129 114 3e-20 seq113 114 3e-20 seq110 105 1e-17 >seq173 Length=69338 Score = 114 bits (126), Expect = 3e-20 Identities = 69/73 (95%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||| Sbjct 24383 AGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTGGTCGTGGGTTCGAG 24324 Query 142563 CCCCACATCGGGC 142575 |||||||| |||| Sbjct 24323 CCCCACATTGGGC 24311 Score = 114 bits (126), Expect = 3e-20 Identities = 69/73 (95%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||| Sbjct 55949 AGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTGGTCGTGGGTTCGAG 56008 Query 142563 CCCCACATCGGGC 142575 |||||||| |||| Sbjct 56009 CCCCACATTGGGC 56021 >seq140 Length=124159 Score = 114 bits (126), Expect = 3e-20 Identities = 69/73 (95%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||| Sbjct 52714 AGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTGGTCGTGGGTTCGAG 52655 Query 142563 CCCCACATCGGGC 142575 |||||||| |||| Sbjct 52654 CCCCACATTGGGC 52642 Score = 114 bits (126), Expect = 3e-20 Identities = 69/73 (95%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||| Sbjct 71896 AGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTGGTCGTGGGTTCGAG 71955 Query 142563 CCCCACATCGGGC 142575 |||||||| |||| Sbjct 71956 CCCCACATTGGGC 71968 >seq129 Length=149469 Score = 114 bits (126), Expect = 3e-20 Identities = 69/73 (95%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||| Sbjct 21148 AGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTGGTCGTGGGTTCGAG 21089 Query 142563 CCCCACATCGGGC 142575 |||||||| |||| Sbjct 21088 CCCCACATTGGGC 21076 >seq113 Length=217474 Score = 114 bits (126), Expect = 3e-20 Identities = 142/192 (74%), Gaps = 8/192 (4%) Strand=Plus/Minus Query 280170 GGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAG 280229 ||| || | |||||||| || || || ||||| ||||| ||||| |||| || || ||| Sbjct 176728 GGTATCGTCGGACCCAACGGAGCCGGAAAGTCGACCCTCATCAAGCTCCTCACCGGAGAG 176669 Query 280230 ACCCAGGCC-ACTGAGG---GGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGT 280285 |||| || ||| || |||| |||||| |||||| | || | || ||||| Sbjct 176668 ACCCTCCCCGACTCCGGAAAGGTCGA----GAAGCACCCCAACCTCCGTGTCGCCTACGT 176613 Query 280286 CGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACAT 280345 |||||||||||| ||||||||||||||| | ||||| || | ||| | | || ||||| Sbjct 176612 CGCTCAGCACGCCTTCCACCACATCGAGGAGCACCTCGAGAAGACCGCCATGCAGTACAT 176553 Query 280346 TCAGTGGCGCTA 280357 |||||||| || Sbjct 176552 CCAGTGGCGTTA 176541 >seq110 Length=230917 Score = 105 bits (116), Expect = 1e-17 Identities = 106/135 (79%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 279699 GGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCG- 279757 || || || || || || |||||||||||||| |||||| ||||||||||||| || || Sbjct 98008 GGATCCCTCTCTGGAGGATGGAAGATGAAGCTCGCCCTCGCTCGCGCCATTCT-CTTCGA 97950 Query 279758 TGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTG 279817 |||||| |||| || || |||||||| ||||||||| |||| | |||||| || || Sbjct 97949 GGCCGATATCCTCCTCCTCGATGAGCCCACCAACCACTTGGATGTTATCAACGTCGCTTG 97890 Query 279818 GCTAGTGTCCTACCT 279832 ||| | | |||||| Sbjct 97889 GCTCGAGAACTACCT 97875 Score = 95.1 bits (104), Expect = 2e-14 Identities = 127/176 (72%), Gaps = 3/176 (2%) Strand=Plus/Minus Query 280173 GTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACC 280232 ||| | |||||||| || | || ||||| ||||| |||| |||| || |||||| Sbjct 97464 GTCCTCGGACCCAACGGATCCGGAAAGTCGACCCTCGTCAAGCTCCTCGTCGGAGAGACC 97405 Query 280233 CAGGCCACTGAGGGGTCCG---TTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCT 280289 |||||| |||| | | |||||||| || ||| | || | |||||||| Sbjct 97404 GAGGCCAACAAGGGTGGAGAGGTCTGGAAGCACCCTAACCTCGTCATCGGATACGTCGCC 97345 Query 280290 CAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACAT 280345 |||||||| |||||||||||||| |||||||| ||| | ||||| ||| ||||| Sbjct 97344 CAGCACGCCTTCCACCACATCGACAACCACCTCGACCTTACTCCCCTCCAGTACAT 97289 Score = 84.2 bits (92), Expect = 4e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 280712 CATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCAGCTCTGTGGCA 280771 ||| || |||||||| ||||| ||||||||||| | || ||| || ||| |||| Sbjct 96782 CATGCGTGGTCTTTCGGGAGGACAGAAGGTCAAGGTCGTTCTCGCCGCCGCTACCTGGCG 96723 Query 280772 ACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGG 280831 | || ||||| || | ||||||||||| |||||||| || || |||||| || | Sbjct 96722 CCGGCCGCACGTCGTCATCCTCGACGAGCCCACCAACTACCTCGATCGCGAGTCGCTCGC 96663 Query 280832 CGCTCTGAGTGCTGCTCTGGACACATTTGGCGGCGGCGTCGTAGTCATTTCTCACAGCAC 280891 |||||| | || || || | || || | || || || | ||||| | |||| | Sbjct 96662 CGCTCTCATCGCCGCGCTCAAGACGTTCGAGGGAGGAGTGCTGGTCATCACCCACAACCG 96603 Query 280892 AGAATTTGTCAAGTCTGTGTGCTCCGAGATGTGG 280925 || || | |||| | ||||| ||| ||||| Sbjct 96602 CGAGTTCTCCGAGTCGATTTGCTCGGAGGTGTGG 96569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027834469058857