Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F002105055.1_202017 -04-20] 177 sequences; 26,329,764 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq91 320 3e-82 seq161 199 7e-46 seq102 96.9 7e-15 >seq91 Length=350055 Score = 320 bits (354), Expect = 3e-82 Identities = 557/805 (69%), Gaps = 14/805 (2%) Strand=Plus/Minus Query 244798 GGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTT 244857 |||||||||||| |||||||| || |||||||||| ||| || |||||| | || Sbjct 141436 GGCGTCCTTGTACAGCATGAAAGGGTTGCCGGTCTCGACCTGAGCCTCGAGGATGGCGTA 141377 Query 244858 CCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTA 244917 |||||| | || || ||| | || ||||| |||||| ||||| | Sbjct 141376 CCAGAGCTTTTGGGCTGGGATGGTCTTCTTGGCGCGACCCTCCTTCTCGTACTGGGTGAA 141317 Query 244918 CAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACAT 244977 ||||||| ||||||| ||| ||||||||| || ||||| | || ||||| | Sbjct 141316 GAGGGCCTTGAACTCGTCGCCGTAGACCTCGTGGAGTCCGGGAGCCTCGGCGGGGCAGAA 141257 Query 244978 GAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGC 245037 ||| ||| ||||| | | || ||| | || ||||||||||||||| ||||| ||||| Sbjct 141256 GAGGGGCCAGTCGCCAGCCTGCTCGACACGCTCCATGAAGAGGTCGGGAATCCAAAGGGC 141197 Query 245038 CTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAA 245097 |||||| ||||| | | ||| ||| ||| |||||| | || || | || Sbjct 141196 GAAGAAGAGATCCCTAGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAA 141137 Query 245098 GTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTT 245157 || |||| |||| ||||||||||||| | ||||| |||| ||| ||||| |||||||| Sbjct 141136 CTCGAAGATGTCGGCGTGCCAGGGCTCGAGGTAGATTGCGAAGGCTCCGGGGCGCTTGTT 141077 Query 245158 GCCTCCCTGGTCCACCATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGTAGGCACTA 245213 |||||||||||| | | | |||||| |||| ||| ||| || | || | | Sbjct 141076 GCCTCCCTGGTCGA----CGTAGCGAGCGGTGTTGTTGTAGACGCGAAGCATGGGGATGA 141021 Query 245214 TGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGA 245273 ||||||| |||| |||||| || || |||||||| ||| | | | || |||| || Sbjct 141020 TGCCGTTCGAGTAGCCGTTCGTTCCGGCGATGTAGGAGCCAGTCGCGCGGATGTTGTGGA 140961 Query 245274 TGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTG 245333 || | || | ||| |||||| |||||||||||||||||| |||||| |||||| Sbjct 140960 TGCTGAGTCCGATTCCTCCGGCGGTCTTGGAGATGAGGGCGCACGTCTTGAGGGTGTCGT 140901 Query 245334 CTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCT 245393 |||||||| ||| || ||||||| ||| || ||||| || || ||||| || | Sbjct 140900 AGATGCCCTCGATGGAATCGTCCTTCATGGTGACGAGGAAGCACGACGAGAGCTGAGGGT 140841 Query 245394 TGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGA 245453 ||| | | | |||||| || || || ||||||||| |||||||| ||| | || Sbjct 140840 GAGGGGTTCCGGCGTTGAAGAGGGTCGGCGAGGCGTGGGTGAAGTAGCGCTCCGACATGA 140781 Query 245454 ACCCGTACGTCTGGAGCAGAGCG-TCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTC 245512 ||||| ||| || | ||| || |||| ||||||||| | ||| | | Sbjct 140780 GGTTGTACGACTGCAG-AACGCGATCAATGTCCGAGCCGTGGATTCCGACAGCGACACGC 140722 Query 245513 ATGAGGGTGTGCTGGGGCGTCTCGATGGGTCCCTCGGGTCCCT--TGAGCATGTAGGAGC 245570 ||||| ||||||| || |||| | | || | ||| | || | ||| |||| Sbjct 140721 ATGAGCATGTGCTGAGGTCGCTCG--GCGACCTTGCCGTCGATGCGAAGGAGGTAAGAGC 140664 Query 245571 GCTCGAGCGTCTTGAACCCAAAGTA 245595 |||||||||||||||| || ||||| Sbjct 140663 GCTCGAGCGTCTTGAAGCCGAAGTA 140639 Score = 96.9 bits (106), Expect = 7e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 244391 TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCG 244450 |||| |||||||| ||||||||||||||||||| ||| | | ||| |||| | Sbjct 142012 TCGATGGCGGCGTGGTAGATGGTCTCGAAGATCTGAAGGTTGAGCTTGCGCGCCTCGGGC 141953 Query 244451 CAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCG 244510 || |||||| | || | ||||||| | ||||| || |||||||| || |||||| Sbjct 141952 GAGTCGAAGGGCAGGCGGAGGGCCATGAAGGCATCGGCGAGACCCTGCACTCCAATGCCG 141893 Query 244511 ATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCG 244570 ||||| | ||| || ||| ||| | ||| || |||||||| ||||| | ||| Sbjct 141892 ATGGGGCGGTGACGAAGGTTCGAGTTCTCGGCCTCCTTGACGGGGTAGTAGTTGACATCG 141833 Query 244571 ATCACCTTGTTGAGGTTG 244588 || | |||||||||| Sbjct 141832 ATGATGCGGTTGAGGTTG 141815 >seq161 Length=98600 Score = 199 bits (220), Expect = 7e-46 Identities = 271/369 (73%), Gaps = 17/369 (5%) Strand=Plus/Plus Query 42748 CCTTCGCCTCCATCTTCTGGCTCAAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCG 42806 |||||||||||||||||||||||||| || || || |||||||||||||||||||| Sbjct 28502 CCTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGACTC-ATGCCCGGACTCACCTTCTCC 28560 Query 42807 AACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCG 42866 ||||| |||||| | |||||||| || || | ||||| ||||||||| ||||||| Sbjct 28561 AACGAGCTCATCTCGCGCGACGAGGGACTTCACACCGACTTCGCCTGCCTCATGTTCTC- 28619 Query 42867 AGCCACCTCAGGCACAAGCCCTCGAAG-GAGCGGGTCCGGGCCATCATCACGGAGGCCGT 42925 ||||||| || | |||| || ||| | ||||||| ||||||||| Sbjct 28620 --CCACCTCGAGCGTC-GTCCTCACCCCGACACCGTCGAGATGATCATCAAGGAGGCCGT 28676 Query 42926 GGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCA 42985 ||||| ||||||||||||||||| || | || ||||| ||||| |||| |||||| Sbjct 28677 CGAGATTGAGAAGGAGTTCCTCACCGAGGCCCTCCCCGTCTCCCTCATCGGAATGAACGC 28736 Query 42986 CGACCTCATGTGCAAGTACATCCAGTACGTCGCCGA---CCATCTCCTGTGCCAGATGGG 43042 | |||||||||| |||||||| ||| ||||||||| || |||| | | || | || Sbjct 28737 CACCCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTTCTCGTCTCCC---TCGG 28793 Query 43043 TCTCAGCCGCCTCTACAACACGCCGTG--CCCCTTCGACTTTATGGAGAACATCTCGTTG 43100 | | | |||||| | | || | |||||||||||| ||| | ||||||| | Sbjct 28794 TAACCCCAAGGTCTACA--AGGTCGAGAACCCCTTCGACTTCATGAACCTCATCTCGCTC 28851 Query 43101 GAGGGCAAG 43109 ||||| ||| Sbjct 28852 GAGGGAAAG 28860 Score = 96.9 bits (106), Expect = 7e-15 Identities = 165/235 (70%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| | |||||||||||| || ||| ||||||||| |||||||| ||||| Sbjct 27859 ATCTGGGCGCAGTACAAGAAGGCCGAGGCTTCCTTCTGGACCGCTGAGGAGATGGACCTT 27918 Query 42360 GCCAAGGACACGGCCGGCTGGGA-GTCA--CTGTCTGAGAACGAAAAGTTTTTCCTCAAA 42416 ||||||| | | || |||||| || || ||| |||| | ||| || | Sbjct 27919 TCCAAGGATATGCACGACTGGGACAACAAGCTCAAGGAGGACGAGCGCTACTTCATCCAG 27978 Query 42417 AACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCA-- 42474 || | || |||||||||||||| || || || || ||||| |||||||| || | | Sbjct 27979 CACGTCCTCGCCTTCTTCGCCGCTTCCGATGGTATCGTCAACGAGAACCT--CCTCGAGC 28036 Query 42475 GGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGAT 42529 | ||| | ||||| |||| | ||||| || ||||||||||| ||||| || Sbjct 28037 GTTTCTCGTCCGAGGTTCAGTGCGCCGAGGCTCGTTGCTTCTACGGATTCCAAAT 28091 >seq102 Length=284969 Score = 96.9 bits (106), Expect = 7e-15 Identities = 105/137 (77%), Gaps = 8/137 (6%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGAC---GCA 42689 |||||||||||||||||||| |||||||| ||| |||||||||| |||| || Sbjct 75965 CCCTGCATCAAGAAGAAGGCCGACTGGGCACTCCGCTGGATCGAG---GACGACTCATCA 76021 Query 42690 ACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGG--GCG 42747 || |||| ||| | || | || || || ||||||||| ||||||||||||| ||| Sbjct 76022 ACCTTCGCCGAACGACTCATCGCTTTCGCCTGCGTCGAGGGAATCTTCTTCTCGGGTGCG 76081 Query 42748 CCTTCGCCTCCATCTTC 42764 ||||| ||||| || || Sbjct 76082 CCTTCCCCTCCCTCCTC 76098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944337110649520