Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F002105055.1_202017 -04-20] 177 sequences; 26,329,764 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq161 132 5e-26 seq136 100 3e-16 >seq161 Length=98600 Score = 132 bits (146), Expect = 5e-26 Identities = 234/337 (69%), Gaps = 17/337 (5%) Strand=Plus/Plus Query 47217 GGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCAC 47276 ||| | |||||||| ||||| || ||||||||| |||||| | ||||| || || ||| Sbjct 28534 GGACTCATGCCCGGACTCACCTTCTCCAACGAGCTCATCTCGCGCGACGAGGGACTTCAC 28593 Query 47277 ACCAACTTTGCCTGTCTC---TACTACAACA-CTAGAGTCGATCAAAAGTTGGACGTGCC 47332 ||| |||| ||||| ||| | || | || | || |||| || | ||| Sbjct 28594 ACCGACTTCGCCTGCCTCATGTTCTCCCACCTCGAGCGTCG-TCCTCACCCCGAC----- 28647 Query 47333 CACCGTCAGCGACATGTTTGCC---GAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGA 47389 |||||| || ||| | | || ||||||| ||||||| |||||| || |||| Sbjct 28648 -ACCGTC---GAGATGATCATCAAGGAGGCCGTCGAGATTGAGAAGGAGTTCCTCACCGA 28703 Query 47390 GGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATT 47449 ||| || |||| || | | ||||||||||| | ||| | |||||||||| || Sbjct 28704 GGCCCTCCCCGTCTCCCTCATCGGAATGAACGCCACCCTCATGTGCCAGTACATCGAGTT 28763 Query 47450 TGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACCGAGAATCC 47509 |||||||||||||| ||||| || | |||||| | ||| | |||||| || Sbjct 28764 CGTCGCCGACCGCCTTCTCGTCTCCCTCGGTAACCCCAAGGTCTACAAGGTCGAGAACCC 28823 Query 47510 ATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAG 47546 ||||| || |||||| ||| ||||||||||| ||| Sbjct 28824 CTTCGACTTCATGAACCTCATCTCGCTCGAGGGAAAG 28860 >seq136 Length=130718 Score = 100 bits (110), Expect = 3e-16 Identities = 130/177 (73%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || | ||||| || || ||||| || || Sbjct 71235 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 71294 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||| |||||||| |||||||| || |||||||||||| ||| || |||| Sbjct 71295 GCGAAGATCAAGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTG 71354 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAG 127092 | |||| |||| |||||| | | |||||| |||| ||| | || || ||||| || Sbjct 71355 ACGTTG-TCGATGGTGTCGGAAGACTCGACCTCGAGGGTGATGGTCTTTCCGGTGAG 71410 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||||||||| | || | || | || | || ||||| || || || ||||| || Sbjct 72453 TCCACCGCGAAGACGGAGAACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 72512 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | ||||| || || ||||| || || ||| ||||||| |||||||| |||||||| Sbjct 72513 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGG 72572 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064 || |||||||||||| ||| || ||||| |||| |||| |||||| | ||| | Sbjct 72573 GATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG-TCGATGGTGTCGGACGACTCAA 72631 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTT 127098 | |||| ||| | || ||||| || || | ||| Sbjct 72632 CCTCGAGGGTGATGGTCTTGCCAGTGAGGGCTTT 72665 Score = 91.5 bits (100), Expect = 1e-13 Identities = 128/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || | ||||| || || ||||| || || Sbjct 72169 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 72228 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||| |||||||| |||||||| || |||||||||||| ||| || |||| Sbjct 72229 GCGAAGATCAAGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTG 72288 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAG 127092 | |||| |||| |||||| | |||||| |||| ||| | || || || || || Sbjct 72289 ACGTTG-TCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTTCCAGTGAG 72344 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || ||| ||||||| |||||||| |||||||| || ||||||||| Sbjct 71588 TCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATTCCCTCCTTG 71647 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| ||| || ||||| |||| |||| |||||| | |||||| |||| ||| | Sbjct 71648 TCCTGGATCTTGGCCTTGACGTTG-TCGATGGTGTCGGACGACTCGACCTCGAGGGTGAT 71706 Query 127078 CGTTTTGCCGGTCAG 127092 || || || || || Sbjct 71707 GGTCTTTCCAGTGAG 71721 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || ||| ||||||| |||||||| |||||||| || ||||||||| Sbjct 71901 TCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATTCCCTCCTTG 71960 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| ||| || |||| |||| |||| |||||| | | |||||| |||| ||| | Sbjct 71961 TCCTGGATCTTGGCTTTGACGTTG-TCGATGGTGTCGGAAGACTCGACCTCGAGGGTGAT 72019 Query 127078 CGTTTTGCCGGTCAG 127092 || || || || || Sbjct 72020 GGTCTTTCCAGTGAG 72034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475499747954480