Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F002105055.1_202017 -04-20] 177 sequences; 26,329,764 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq136 122 2e-22 seq139 107 5e-18 seq10 105 2e-17 >seq136 Length=130718 Score = 122 bits (134), Expect = 2e-22 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| ||||| |||||||||||||| |||| ||||||||| | | || Sbjct 71522 CGAAGACGAAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTA 71581 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| ||||||||||| | ||||||||||| ||| ||||| Sbjct 71582 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATTCCC 71641 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| |||| |||||| | | || || || | Sbjct 71642 TCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCGAGG 71701 Query 199589 GTGATCGTCTTACCCGTGAG 199608 ||||| ||||| || ||||| Sbjct 71702 GTGATGGTCTTTCCAGTGAG 71721 Score = 120 bits (132), Expect = 7e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || ||||| |||||||||||||| |||| ||||||||| | | || Sbjct 72460 CGAAGACGGAGAACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTG 72519 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| ||||||||||| | ||||||||||| ||| ||||| Sbjct 72520 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATTCCC 72579 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| |||| |||||| | | || || || | Sbjct 72580 TCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGACGACTCAACCTCGAGG 72639 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTT 199614 ||||| ||||| || ||||| | ||| Sbjct 72640 GTGATGGTCTTGCCAGTGAGGGCTTT 72665 Score = 118 bits (130), Expect = 2e-21 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| ||||| |||||||||||||| |||| ||||||||| | | || Sbjct 71835 CGAAGACGAAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTA 71894 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| ||||||||||| | ||||||||||| ||| ||||| Sbjct 71895 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATTCCC 71954 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| || ||| |||| |||||| | | || || || | Sbjct 71955 TCCTTGTCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGG 72014 Query 199589 GTGATCGTCTTACCCGTGAG 199608 ||||| ||||| || ||||| Sbjct 72015 GTGATGGTCTTTCCAGTGAG 72034 Score = 118 bits (130), Expect = 2e-21 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || |||||||| ||||||||||| |||| ||||||||| | | || Sbjct 72145 CGAAGACGGAGAACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTG 72204 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| ||||||||||| | ||||||||||| ||| ||||| Sbjct 72205 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATTCCC 72264 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| |||| |||||| | | || || || | Sbjct 72265 TCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCGAGG 72324 Query 199589 GTGATCGTCTTACCCGTGAG 199608 ||||| ||||| || ||||| Sbjct 72325 GTGATGGTCTTTCCAGTGAG 72344 Score = 114 bits (126), Expect = 3e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| |||||||||||||| |||| ||||||||| | | || | || || Sbjct 71220 AGAACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCC 71279 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||| | ||||||||||| ||| ||||| || ||| Sbjct 71280 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCC 71339 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 71340 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGGGTGATGGTC 71399 Query 199598 TTACCCGTGAG 199608 || || ||||| Sbjct 71400 TTTCCGGTGAG 71410 Score = 104 bits (114), Expect = 6e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| |||||||| ||||||||||| |||| ||||||||| | | || Sbjct 72774 CGAAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTG 72833 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| ||||||||||| | ||||||||||| ||| ||||| Sbjct 72834 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATTCCC 72893 Query 199529 TCTCGCTCCTGAATCTT 199545 || ||||| ||||| Sbjct 72894 TCCTTGTCCTGGATCTT 72910 >seq139 Length=125316 Score = 107 bits (118), Expect = 5e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || |||||||| |||||||||||||| |||| ||||||||| | | || Sbjct 15360 CGAAGACGGAGCACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTG 15419 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || ||||||||||| |||||||||||||||||||| || || ||||| Sbjct 15420 CGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCAGGGGGGATTCCC 15479 Query 199529 TCTCGCTCCTGAATCTT 199545 || ||||| ||||| Sbjct 15480 TCCTTGTCCTGGATCTT 15496 >seq10 Length=56356 Score = 105 bits (116), Expect = 2e-17 Identities = 100/128 (78%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| || ||||||||||| |||| ||||||||| | | || | || || Sbjct 7753 AGGACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 7694 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||||||||| |||||||| || ||||| || ||| Sbjct 7693 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCAGGGGGGATTCCCTCCTTGTCC 7634 Query 199538 TGAATCTT 199545 || ||||| Sbjct 7633 TGGATCTT 7626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178918926426859