Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F002105055.1_202017 -04-20] 177 sequences; 26,329,764 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq136 138 1e-27 seq10 96.9 4e-15 seq139 87.8 2e-12 >seq136 Length=130718 Score = 138 bits (152), Expect = 1e-27 Identities = 139/178 (78%), Gaps = 2/178 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || ||||| |||| |||||||||||||||||||| Sbjct 72489 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 72548 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||||||||||||||||| || | | |||||||||| |||||| ||||| ||| Sbjct 72549 GATCAAGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 72607 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | | |||||| ||| || || || | |||||||| ||||| || || | ||| Sbjct 72608 TGTCGATGGTGTCGGACGACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGGGCTTT 72665 Score = 132 bits (146), Expect = 5e-26 Identities = 134/172 (78%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || ||||| |||| |||||||||||||||||||| Sbjct 72174 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 72233 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||||||||||||||||| || | | |||||||||| |||||| ||||| ||| Sbjct 72234 GATCAAGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 72292 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAG 46572 | | | |||||| ||| || || || | |||||||| || || || || Sbjct 72293 TGTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTTCCAGTGAG 72344 Score = 127 bits (140), Expect = 2e-24 Identities = 133/172 (77%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || ||||| |||| |||||||||||||||||||| Sbjct 71240 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 71299 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||||||||||||||||| || | | |||||||||| |||||| ||||| ||| Sbjct 71300 GATCAAGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 71358 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAG 46572 | | | |||||| || || || || | |||||||| || || || || Sbjct 71359 TGTCGATGGTGTCGGAAGACTCGACCTCGAGGGTGATGGTCTTTCCGGTGAG 71410 Score = 127 bits (140), Expect = 2e-24 Identities = 133/172 (77%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || || || |||| |||||||||||||||||||| Sbjct 71551 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 71610 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||||||||||||||||| || | | |||||||||| |||||| ||||| ||| Sbjct 71611 GATCAAGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 71669 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAG 46572 | | | |||||| ||| || || || | |||||||| || || || || Sbjct 71670 TGTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTTCCAGTGAG 71721 Score = 120 bits (132), Expect = 3e-22 Identities = 96/116 (83%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || ||||| |||| |||||||||||||||||||| Sbjct 72803 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 72862 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA 46517 ||||||||||||||||||| || | | |||||||||| |||||| ||||| Sbjct 72863 GATCAAGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGA 72918 Score = 118 bits (130), Expect = 1e-21 Identities = 131/172 (76%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || || || |||| |||||||||||||||||||| Sbjct 71864 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 71923 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||||||||||||||||| || | | |||||||||| |||||| |||| ||| Sbjct 71924 GATCAAGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCCTGGATCTTGGCTTTGA-CGT 71982 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAG 46572 | | | |||||| || || || || | |||||||| || || || || Sbjct 71983 TGTCGATGGTGTCGGAAGACTCGACCTCGAGGGTGATGGTCTTTCCAGTGAG 72034 >seq10 Length=56356 Score = 96.9 bits (106), Expect = 4e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || ||||| |||| |||||||||||||||||||| Sbjct 7733 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 7674 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA 46517 || | || |||||||| | || | | |||||||||| |||||| ||||| Sbjct 7673 GATGAGACGTTGCTGGTCAGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGA 7618 >seq139 Length=125316 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || ||||| |||| ||||||||||| || ||||| Sbjct 15389 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCGAA 15448 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA 46517 || | |||||||| || | || | | |||||||||| |||||| ||||| Sbjct 15449 GATGAGACGCTGCTGATCAGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGA 15504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237149410040