Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F002105055.1_202017 -04-20] 177 sequences; 26,329,764 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq161 158 1e-33 seq136 123 2e-23 seq139 95.1 1e-14 seq10 93.3 4e-14 seq102 84.2 2e-11 >seq161 Length=98600 Score = 158 bits (174), Expect = 1e-33 Identities = 169/223 (76%), Gaps = 3/223 (1%) Strand=Plus/Minus Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTC 133277 |||||| || ||||| ||||| || |||||| | ||| || || | ||||||||| Sbjct 28092 GATTTGGAATCCGTAGAAGCAACGAGCCTCGGCGCACTGAACCTCGGACGAGAAACGCTC 28033 Query 133278 GACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGAT 133337 || || || ||||||||||| || ||| |||||||| ||||| || ||||||| ||| Sbjct 28032 GAGGAGGTTCTCGTTGACGATACCATCGGAAGCGGCGAAGAAGGCGAGGACGTGCTGGAT 27973 Query 133338 GAAATGGCGCTCGTTGTCGTT---CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTC 133394 ||| | |||||||| || || | | ||||||||| || | |||||||| ||||| Sbjct 27972 GAAGTAGCGCTCGTCCTCCTTGAGCTTGTTGTCCCAGTCGTGCATATCCTTGGAAAGGTC 27913 Query 133395 CACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTAC 133437 || |||||| ||||||| || || |||||||| || |||||| Sbjct 27912 CATCTCCTCAGCGGTCCAGAAGGAAGCCTCGGCCTTCTTGTAC 27870 Score = 111 bits (122), Expect = 2e-19 Identities = 245/361 (68%), Gaps = 10/361 (3%) Strand=Plus/Minus Query 132643 TTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTG 132702 |||||||| | || ||||| |||| || || |||||||| | |||||| |||| Sbjct 28859 TTTCCCTCGAGCGAGATGAGGTTCATGAAGTCGAAGGGGTTCTCGACCTTGTAGACCTTG 28800 Query 132703 GTG---CCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG 132759 | | |||| || |||||| || | |||||| |||||||||||||| || ||||| Sbjct 28799 GGGTTACCGA---GGGAGACGAGAAGGCGGTCGGCGACGAACTCGATGTACTGGCACATG 28743 Query 132760 -GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTC 132818 | | || || | ||| | || || || || || |||||||| || | ||| Sbjct 28742 AGGGTGGCG-TTCATTCCGATGAGGGAGACGGGGAGGGCCTCGGTGAGGAACTCCTTCTC 28684 Query 132819 GATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTC-GGCCGTTGCACCA 132877 || |||| || || ||| ||| | ||| | | || | | || || || | | Sbjct 28683 AATCTCGACGGCCTCCTTGATGATCATCTCGACG-GTGTCGGGGTGAGGACGACGCTCGA 28625 Query 132878 AATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTT 132937 || |||||| | ||| || |||||| || | |||||||| | || ||||| | Sbjct 28624 GGTGGGAGAACATGAGGCAGGCGAAGTCGGTGTGAAGTCCCTCGTCGCGCGAGATGAGCT 28565 Query 132938 CGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGA 132997 ||||| ||| || | ||||||||||| ||||| || |||||||| || |||| ||||| Sbjct 28564 CGTTGGAGAAGGTGAGTCCGGGCATGAGTCCGCGCTTCTTGAGCCAGAAGATGGAGGCGA 28505 Query 132998 A 132998 | Sbjct 28504 A 28504 >seq136 Length=130718 Score = 123 bits (136), Expect = 2e-23 Identities = 150/202 (74%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 38259 AAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AAC 38317 ||| | ||||| ||||| ||||||||| |||| || ||| | |||||| | | | ||| Sbjct 72665 AAAGCCCTCACTGGCAAGACCATCACCCTCGAGGTTGAGTCGTCCGACACCATCGACAAC 72606 Query 38318 GCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTA 38377 | | || | || |||| ||||| |||||||| || ||||||| ||||| | || | Sbjct 72605 G-TCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCTTGATCTT 72547 Query 38378 CGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGC 38437 ||| ||||| ||||| || |||| ||||||||| |||||||||||||| ||||| | Sbjct 72546 CGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTC 72487 Query 38438 GACGCTGCATTTGGTGCTGCGT 38459 ||| || || | || || ||| Sbjct 72486 GACTCTTCACCTCGTTCTCCGT 72465 Score = 122 bits (134), Expect = 9e-23 Identities = 146/196 (74%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 38265 CTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAA 38323 ||||| || || ||||||||| |||| |||||| | |||||| | | | |||| | || Sbjct 71410 CTCACCGGAAAGACCATCACCCTCGAGGTCGAGTCTTCCGACACCATCGACAACG-TCAA 71352 Query 38324 AGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 | || |||| ||||| |||||||| || ||||||| ||||| | || | ||| || Sbjct 71351 GGCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCTTGATCTTCGCCGG 71292 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 ||| ||||| || |||| ||||||||| |||||||||||||| ||||| |||| || Sbjct 71291 CAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACTCT 71232 Query 38444 GCATTTGGTGCTGCGT 38459 || | || || ||| Sbjct 71231 TCACCTCGTTCTCCGT 71216 Score = 122 bits (134), Expect = 9e-23 Identities = 146/196 (74%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 38265 CTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAA 38323 ||||| || || ||||||||| |||| |||||| | |||||| | | | |||| | || Sbjct 72344 CTCACTGGAAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACCATCGACAACG-TCAA 72286 Query 38324 AGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 | || |||| ||||| |||||||| || ||||||| ||||| | || | ||| || Sbjct 72285 GGCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCTTGATCTTCGCCGG 72226 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 ||| ||||| || |||| ||||||||| |||||||||||||| ||||| |||| || Sbjct 72225 CAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACCCT 72166 Query 38444 GCATTTGGTGCTGCGT 38459 || | || || ||| Sbjct 72165 CCACCTCGTTCTCCGT 72150 Score = 116 bits (128), Expect = 4e-21 Identities = 145/196 (74%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 38265 CTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAA 38323 ||||| || || ||||||||| |||| |||||| | |||||| | | | |||| | || Sbjct 72034 CTCACTGGAAAGACCATCACCCTCGAGGTCGAGTCTTCCGACACCATCGACAACG-TCAA 71976 Query 38324 AGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 || || |||| ||||| |||||||| || ||||||| ||||| | || | ||| || Sbjct 71975 AGCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCTTGATCTTCGCCGG 71916 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 ||| ||||| || |||| || ||||| |||||||||||||| ||||| |||| || Sbjct 71915 CAAGCAGCTCGAGGACGGCCGTACCCTTTCGGACTACAACATCCAGAAGGAGTCGACTCT 71856 Query 38444 GCATTTGGTGCTGCGT 38459 || | || || ||| Sbjct 71855 TCACCTCGTCCTTCGT 71840 Score = 113 bits (124), Expect = 5e-20 Identities = 144/196 (73%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 38265 CTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAA 38323 ||||| || || ||||||||| |||| |||||| | |||||| | | | |||| | || Sbjct 71721 CTCACTGGAAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACCATCGACAACG-TCAA 71663 Query 38324 AGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 | || |||| ||||| |||||||| || ||||||| ||||| | || | ||| || Sbjct 71662 GGCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCTTGATCTTCGCCGG 71603 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 ||| ||||| || |||| || ||||| |||||||||||||| ||||| |||| || Sbjct 71602 CAAGCAGCTCGAGGACGGCCGTACCCTTTCGGACTACAACATCCAGAAGGAGTCGACTCT 71543 Query 38444 GCATTTGGTGCTGCGT 38459 || | || || ||| Sbjct 71542 TCACCTCGTCCTTCGT 71527 Score = 95.1 bits (104), Expect = 1e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || |||| ||||| |||||||| || ||||||| ||||| | || | ||| ||||| Sbjct 72910 AAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCTTGATCTTCGCCGGCAAG 72851 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447 ||||| || |||| ||||||||| |||||||||||||| ||||| |||| || || Sbjct 72850 CAGCTCGAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTCCAC 72791 Query 38448 TTGGTGCTGCGT 38459 | || || ||| Sbjct 72790 CTCGTCCTCCGT 72779 >seq139 Length=125316 Score = 95.1 bits (104), Expect = 1e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || |||| ||||| |||||||| ||| | || || ||||| ||||| | ||| || || Sbjct 15496 AAGATCCAGGACAAGGAGGGAATCCCCCCTGATCAGCAGCGTCTCATCTTCGCTGGAAAG 15437 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447 ||||| || |||| |||||||| |||||||||||||| ||||| |||| || || Sbjct 15436 CAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACTCTTCAC 15377 Query 38448 TTGGTGCTGCGT 38459 | ||||| ||| Sbjct 15376 CTTGTGCTCCGT 15365 >seq10 Length=56356 Score = 93.3 bits (102), Expect = 4e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || |||| ||||| |||||||| ||| | ||||| || || ||||| | ||| ||||| Sbjct 7626 AAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAGCAACGTCTCATCTTCGCCGGCAAG 7685 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 ||||| || |||| |||||||| |||||||||||||| ||||| |||| || || Sbjct 7686 CAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTTCA 7744 >seq102 Length=284969 Score = 84.2 bits (92), Expect = 2e-11 Identities = 84/107 (79%), Gaps = 4/107 (4%) Strand=Plus/Minus Query 132894 GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAA 132953 |||||| || ||| ||| | ||| ||||||| || ||||| |||||| |||| || Sbjct 76245 GCAAGCGAAATCGGTATGAAGGCCTTCGTCCCGCGAGATGAGCTCGTTG--GAAAAGCAG 76188 Query 132954 --GCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAA 132998 ||||||||| || ||||| ||||||||||||||||| | |||||| Sbjct 76187 AGGCCGGGCATTAGACCGCGCTTTTTGAGCCAAAATATTGAGGCGAA 76141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171693367680