Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F002105055.1_202017 -04-20] 177 sequences; 26,329,764 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq161 125 1e-23 seq102 100 5e-16 seq91 87.8 3e-12 >seq161 Length=98600 Score = 125 bits (138), Expect = 1e-23 Identities = 208/295 (71%), Gaps = 19/295 (6%) Strand=Plus/Minus Query 47954 AGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013 || ||| | || |||||| |||||||||| | ||||||||||| |||||| || ||| Sbjct 28781 AGAAGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAGGGTGGCGTTCATTCCGATG 28722 Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073 ||||| ||||| | |||| ||||| ||||||||||| |||| ||||| ||| | Sbjct 28721 AGGGAGACGGGGAGGGCCTCGGTGAGGAACTCCTTCTCAATCTCGACGGCCTCCTTGATG 28662 Query 48074 ATCTGCTTAACG----CGGGACTCTGAGGGTTTGTTGCGC-AGGTGCTTGGCATAGAGCA 48128 ||| || ||| |||| ||||| | || | ||||| || ||| || Sbjct 28661 ATCATCTCGACGGTGTCGGG---GTGAGG--ACGACGCTCGAGGTG---GG---AGAACA 28613 Query 48129 T---GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGC 48185 | |||||| ||||| |||| | || ||||| || ||||||| ||||||||||| Sbjct 28612 TGAGGCAGGCGAAGTCGGTGTGAAGTCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGG 28553 Query 48186 AGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCC 48240 ||| || ||||||| || | || ||||||||||| || | ||||| || || Sbjct 28552 TGAGTCCGGGCATGAGTCCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGATCC 28498 Score = 84.2 bits (92), Expect = 4e-11 Identities = 90/116 (78%), Gaps = 6/116 (5%) Strand=Plus/Minus Query 48239 CCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGA---A 48295 || ||||||||||| ||||| || |||||||| ||| |||| | |||||| ||||| | Sbjct 28430 CCCGAGAAGAAGATACCCTCGACGGCCGCGAAGGCGATGAGGCGCTCTCC-AAAGATGGA 28372 Query 48296 GCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 || || ||| || ||||| || ||||| || ||||||||||||||||| || Sbjct 28371 ACGGTC--GTCCGAAATCCACTTGAGGGCCCACTCGGCCTTCTTCTTGATGCAGGG 28318 >seq102 Length=284969 Score = 100 bits (110), Expect = 5e-16 Identities = 163/234 (70%), Gaps = 3/234 (1%) Strand=Plus/Minus Query 48454 GATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTC 48513 |||||| ||||| |||||| ||| |||||| |||||| || | | || ||||| Sbjct 75724 GATCTGAAACCCATAGAAGCTCCTCGCCTCAGCGCACTGCACCTCCGAGCTAAACCTCTC 75665 Query 48514 CAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAG 48573 || || ||||||||||| || ||||| || || | ||||||||||||||||| || Sbjct 75664 CACCAAGTTCTCATTGACGATGCCATCCGACGCCGAGAAGAAGGCAAGGACATGCGAAAC 75605 Query 48574 GAAATGGCGCTCGTTGTGGGTGA---GAGCATTCCAGCCCTGTACGTCTTTGCCCAGGTC 48630 ||| | |||||||| || | ||| | || ||| | || ||| ||| || || Sbjct 75604 GAAGTAGCGCTCGTCGTCGTTGAGCCGGTGATGCCAATCGACTAGGTCGCCGCCTAGATC 75545 Query 48631 CACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684 | || || | |||||||| || || | || | ||||||||| |||| || Sbjct 75544 AATCTCCTCTGCCGTCCAGAACGATGCTTGCGCCCTCTTGTACATGGCCCAGAT 75491 Score = 93.3 bits (102), Expect = 8e-14 Identities = 167/242 (69%), Gaps = 9/242 (4%) Strand=Plus/Minus Query 48002 TTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACG 48061 ||||| || || | | || ||||| |||| | | |||||||||||| |||| ||| Sbjct 76370 TTCATCCCAATCAAGCTAACAGGCAACGCCTCACTCAAAAACTCCTTCTCAATCTCCACC 76311 Query 48062 GCTTCCCCCACAATCTGCTTAACGCGGGACTC---TGAGGGTTTGTTGCGCAGGTGCTTG 48118 ||||||| || |||| | ||| | ||| ||| || | | || || | Sbjct 76310 GCTTCCCTAACGATCTCCGAAACA---GTCTCGTGTGAAGGACGATGATGTAGATG---G 76257 Query 48119 GCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTG 48178 | |||| | ||| || || || | || | |||||||||||| ||||||| ||||| Sbjct 76256 GAGAAGAGGAGGCAAGCGAAATCGGTATGAAGGCCTTCGTCCCGCGAGATGAGCTCGTTG 76197 Query 48179 GAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAG 48238 || |||||||| || ||||| | || | || ||||||||| || |||| ||||| ||| Sbjct 76196 GAAAAGCAGAGGCCGGGCATTAGACCGCGCTTTTTGAGCCAAAATATTGAGGCGAAGGAG 76137 Query 48239 CC 48240 || Sbjct 76136 CC 76135 >seq91 Length=350055 Score = 87.8 bits (96), Expect = 3e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 213192 GCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTG 213251 |||| ||||| |||| || | ||| |||| ||||||||| || || |||| |||| Sbjct 142030 GCCATGTCGCACGACGACTCGATGGCGGCGTGGTAGATGGTCTCGAAGATCTGAAGGTTG 141971 Query 213252 AGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGC 213311 ||||| ||||| || || |||||||| | | ||| |||| || || Sbjct 141970 AGCTTGCGCGCCTCGGGCGAGTCGAAGGGCAGGCGGAGGGCCATGAAGGCATCGGCGAGA 141911 Query 213312 CCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAG 213371 ||||| || || ||||||||||| | ||| | ||||| || || | ||||| | | Sbjct 141910 CCCTGCACTCCAATGCCGATGGGGCGGTGACGAAGGTTCGAGTTCTCGGCCTCCTTGACG 141851 Query 213372 GGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTG 213407 ||||| ||||| |||||||| |||||||||| Sbjct 141850 GGGTAGTAGTTGACATCGATGATGCGGTTGAGGTTG 141815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931530738983680