Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F002105055.1_202017 -04-20] 177 sequences; 26,329,764 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq91 170 4e-37 seq161 84.2 4e-11 >seq91 Length=350055 Score = 170 bits (188), Expect = 4e-37 Identities = 451/682 (66%), Gaps = 15/682 (2%) Strand=Plus/Minus Query 221819 TTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATC 221878 || || ||||||||||| ||||| || || ||| ||||| | ||||||| | || || Sbjct 141441 TTCGCGGCGTCCTTGTACAGCATGAAAGGGTTGCCGGTCTCGACCTGAGCCTCGAGGATG 141382 Query 221879 TTGTCCCAGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATAC 221938 || |||||| | | ||| | ||| ||||| | |||||| ||| || ||| Sbjct 141381 GCGTACCAGAGCTTTTGGGCTGGGATGGTCTTCTTGGCGCGACCCTC---CTTCTCGTAC 141325 Query 221939 CCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCG 221998 ||| |||| | |||| || ||||| |||||| || || ||| | |||| Sbjct 141324 TGGGTGAAGAGGGCCTTGAACTCGTCGCCGTAGACCTCGTGGAGTCCGGGAGCCTCGGCG 141265 Query 221999 GGACACATCAGACTCCAGT-GCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGAT 222057 || || | || ||||| || | || ||| | || |||||||||||| || || Sbjct 141264 GGGCAGAAGAGGGGCCAGTCGCCAGCCTGCTC-GACACGCTCCATGAAGAGGTCGGGAAT 141206 Query 222058 CCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAG 222117 ||| || || |||||||| || | || ||||||| ||||| ||| || | || Sbjct 141205 CCAAAGGGCGAAGAAGAGATCCCTAGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAG 141146 Query 222118 ATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGG 222177 || | ||||| || ||||| |||||||| ||||| || |||| || | || ||||| Sbjct 141145 GTCGAGGAACTCGAAGATGTCGGCGTGCCAGGGCTCGAGGTAGATTGCGAAGGCTCCGGG 141086 Query 222178 TCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG----CGTTGAAGATGCGAAGGG 222233 ||||||||||| ||||| || | | | | || | |||| ||| |||||| Sbjct 141085 GCGCTTGTTGCCTCCCTGGTCGA----CGTAGCGAGCGGTGTTGTTGTAGACGCGAAGCA 141030 Query 222234 TCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCA 222293 | || | | ||||| || ||||| || || ||||| | || || | | Sbjct 141029 TGGGGATGATGCCGTTCGAGTAGCCGTTCGTTCCGGCGATGTAGGAGCCAGTCGCGCGGA 140970 Query 222294 GGTTACTGGCAG-ACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTG 222352 ||| ||| | | ||||| || |||||| || ||||| | |||||| ||||| Sbjct 140969 TGTT-GTGGATGCTGAGTCCGATTCCTCCGGCGGTCTTGGAGATGAGGGCGCACGTCTTG 140911 Query 222353 AGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGAC 222412 || ||||| ||||||||| || || || ||||| | | | | || || || ||||| Sbjct 140910 AGGGTGTCGTAGATGCCCTCGATGGAATCGTCCTTCATGGTGACGAGGAAGCACGACGAG 140851 Query 222413 ATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCC 222472 | ||||| | | || | |||||| || || || || |||||| || ||||||| | Sbjct 140850 AGCTGAGGGTGAGGGGTTCCGGCGTTGAAGAGGGTCGGCGAGGCGTGGGTGAAGTAGCGC 140791 Query 222473 CTAGACATCAGATCGTACGTCT 222494 ||||| || | ||||| || Sbjct 140790 TCCGACATGAGGTTGTACGACT 140769 >seq161 Length=98600 Score = 84.2 bits (92), Expect = 4e-11 Identities = 160/235 (68%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || |||| | |||||||||||| | || ||||||||| || ||||| || || Sbjct 27859 ATCTGGGCGCAGTACAAGAAGGCCGAGGCTTCCTTCTGGACCGCTGAGGAGATGGACCTT 27918 Query 25537 GCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 ||||||| ||| ||| |||| || |||| | | ||||||| | || || Sbjct 27919 TCCAAGGATATGCACGACTGGGACAACAAGCTCAA--GGAGGACGAGCGCTACTTCATCC 27976 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 || |||| | || ||||| || || || |||||||| || |||||||| || |||| Sbjct 27977 AGCACGTCCTCGCCTTCTTCGCCGCTTCCGATGGTATCGTCAACGAGAACCTCCTCGAGC 28036 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 | ||| | || || |||| || ||||| || |||||||| ||||| || Sbjct 28037 GTTTCTCGTCCGAGGTTCAGTGCGCCGAGGCTCGTTGCTTCTACGGATTCCAAAT 28091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928842744930880