Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F002105055.1_202017 -04-20] 177 sequences; 26,329,764 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq91 217 2e-50 seq161 143 3e-28 seq1 120 4e-21 seq136 113 6e-19 >seq91 Length=350055 Score = 217 bits (240), Expect = 2e-50 Identities = 285/394 (72%), Gaps = 17/394 (4%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||||||||||||||| || |||| ||| ||||||| |||||||| | || |||||| || Sbjct 141070 CTGGTCGACGTAGCGAGCGGTGTTGTTGTAGACGCGAAGCATGGGGATGATGCCGTTCGA 141011 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAG-C 1630183 | |||||| || || || | ||||| ||| | ||||| | ||||| | || || | Sbjct 141010 GTAGCCGTTCGTTCCGGCGATGTAGGAGCCAGTCGCGCGGATGTTGTG-GATGCTGAGTC 140952 Query 1630184 CGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCT 1630243 |||| || ||||| | |||||||||||| |||||| ||||| |||||||||||||||| Sbjct 140951 CGATTCCTCCGGCGGTCTTGGAGATGAGGGCGCACGTCTTGAGGGTGTCGTAGATGCCCT 140892 Query 1630244 CGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGC 1630303 |||| || ||| |||||||| ||||| |||||||||||| || ||||| | || | Sbjct 140891 CGATGGAATCGTCCTTCATGGTGACGAGGAAGCACGACGAGAGCTGAGGGTGAGGGGTTC 140832 Query 1630304 CGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGG 1630363 ||||||||||||| || |||| || |||||| | || ||||||| || ||| | Sbjct 140831 CGGCGTTGAAGAGGGTCGGCGAGGCGTGGGTGAAGTAGCGCTCCGACATGAGGTTGTACG 140772 Query 1630364 TGGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGA 1630423 || ||||| || | ||| | | || | | |||| |||| Sbjct 140771 ACTGCAGAACGCG------------ATCAATGTCCG---AGCCGTGGATTCCGACAGCGA 140727 Query 1630424 CGCGCATGAGCATGTACTGGGGCCGCTCGACGAC 1630457 | ||||||||||||| ||| || |||||| |||| Sbjct 140726 CACGCATGAGCATGTGCTGAGGTCGCTCGGCGAC 140693 Score = 138 bits (152), Expect = 1e-26 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 1628372 CGCCGTAGCACTCGTGCAGGCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCAC 1628431 |||||||| |||||| || ||||| ||||||| || || ||||| | |||||||||| Sbjct 141299 CGCCGTAGACCTCGTGGAGTCCGGGAGCCTCGGCGGGGCAGAAGAGGGGCCAGTCGCCAG 141240 Query 1628432 CGGTCACCGCGCGGCGCATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCG 1628491 | | | | || ||| |||||||| |||| || ||| | ||||| || | | Sbjct 141239 CCTGCTCGACACGCTCCATGAAGAGGTCGGGAATCCAAAGGGCGAAGAAGAGATCCCTAG 141180 Query 1628492 CCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGT 1628551 | || ||||||||||||||||||||| ||||||||| | |||| |||||||||| Sbjct 141179 CGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCGAAGATGTCGGCGT 141120 Query 1628552 GCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600 |||| ||||| |||||| || ||||| || ||||||| ||| || Sbjct 141119 GCCAGGGCTCGAGGTAGATTGCGAAGGCTCCGGGGCGCTTGTTGCCTCC 141071 Score = 89.7 bits (98), Expect = 6e-12 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 1627870 TCGGCGAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGGCGGGCC 1627929 |||||||| |||||||| || | ||| || || ||||| || |||||||||| |||| Sbjct 141919 TCGGCGAGACCCTGCACTCCAATGCCGATGGGGCGGTGACGAAGGTTCGAGTTCTCGGCC 141860 Query 1627930 TCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTGCCCACCACGACCTG 1627988 || || ||||||| ||||| ||||| | ||||||||||||| | |||||||| Sbjct 141859 TCCTTGACGGGGTAGTAGTTGACATCGATGATGCGGTTGAGGTTGAAGGCGACGACCTG 141801 >seq161 Length=98600 Score = 143 bits (158), Expect = 3e-28 Identities = 153/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 868732 CTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTT 868791 ||| |||||||||||||| | | ||| | ||| ||||| ||||||| ||| Sbjct 28860 CTTTCCCTCGAGCGAGATGAGGTTCATGAAGTCGAAGGGGTTCTCGACCTTGTAGACCTT 28801 Query 868792 TTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAG 868851 | ||||| || |||| |||||||||||||| ||||||||||||||||||||||| Sbjct 28800 GGGGTTACCGAGGGAGACGAGAAGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAG 28741 Query 868852 GCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGAT 868911 | ||||||||| |||||||| | || || || | |||| | | ||||| ||||| || Sbjct 28740 GGTGGCGTTCATTCCGATGAGGGAGACGGGGAGGGCCTCGGTGAGGAACTCCTTCTCAAT 28681 Query 868912 CTCGACGGCCTCGACGATGATC 868933 |||||||||||| ||||||| Sbjct 28680 CTCGACGGCCTCCTTGATGATC 28659 >seq1 Length=1516574 Score = 120 bits (132), Expect = 4e-21 Identities = 136/180 (76%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 1254381 GTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCC 1254440 |||||||||||||||| | ||| || |||||| | || || | |||| Sbjct 1049886 GTCTGGATCTCGCGCGAGGAGATGGTCGACTTCTTGTTGTAAGAAGCGAGCTTGGAGGCC 1049827 Query 1254441 TCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGA-CATCGACTT 1254499 ||| | ||||||| |||| ||||||||||| || ||||||| || || ||| | ||| Sbjct 1049826 TCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAAGAGTTCA-GAATGAGCATGGCCTT 1049768 Query 1254500 GTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 ||||||||| || ||||||||| ||||||||||| |||||||||||| |||| ||||| Sbjct 1049767 GTTGGAGATTCCAGTGTCGGGGTGAACCTGCTTGAGGACCTTGTAGATGTACGAGGAGTA 1049708 Score = 113 bits (124), Expect = 6e-19 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||| || |||||| | | ||| ||||| || | ||||||||||| |||| | || Sbjct 777067 GCTTGGAAAGCTCGCCGGGGAGGATGAGGCGAACCGACGTCTGGATCTCACGCGAGGAGA 777008 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||| || || || | ||||||| ||||||| |||| | Sbjct 777007 TGGTCGACTTCTTGTTGTAGGAAGCGAGCTTGGAGGCCTCGCCAGCGATGCGCTCGAAGA 776948 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| |||||||||| || ||| | |||||||||||| || |||||||| Sbjct 776947 TGTCGTTGACGAACGAGTTCAGGATGAGCATGGCCTTGTTGGAGATTCCAGTGTCGGGGT 776888 Query 1254523 GCACCTGCTTGAGCACCTTG 1254542 | ||||||||||| |||||| Sbjct 776887 GGACCTGCTTGAGGACCTTG 776868 Score = 109 bits (120), Expect = 7e-18 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||| || || ||| | | ||| ||||| || | ||||||||||| |||| | || Sbjct 1191238 GCTTGGAAAGCTCTCCGGGGAGGATGAGGCGGACCGAAGTCTGGATCTCACGCGAGGAGA 1191297 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||| || || || | ||||||| | ||||||| |||| | Sbjct 1191298 TGGTCGACTTCTTGTTATAGGAAGCGAGCTTGGAGGCCTCGCCGGCGATGCGCTCGAAGA 1191357 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || ||||||| || ||| | |||||||||||| || |||||||| Sbjct 1191358 TGTCGTTGACGAAAGAGTTCAAGATAAGCATGGCCTTGTTGGAGATACCAGTGTCGGGGT 1191417 Query 1254523 GCACCTGCTTGAGCACCTTG 1254542 | ||||||||||| |||||| Sbjct 1191418 GGACCTGCTTGAGGACCTTG 1191437 >seq136 Length=130718 Score = 113 bits (124), Expect = 6e-19 Identities = 111/142 (78%), Gaps = 1/142 (1%) Strand=Plus/Plus Query 19052 CATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCCGTG 19111 |||||| || || || || |||||| |||||| || || ||||||||||| Sbjct 77203 CATCGGAGGAACCGTCACCTGCGTGATTCGCAAGTCTCCCATCGGACTCGGCGAGCCCGT 77262 Query 19112 CTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGG 19171 |||||||||| ||||||| ||||||||||||||||| || ||||| ||||||||||| Sbjct 77263 CTTTGACAAGCTCGAGGCTCTCCTCGCCCACGCCATGCTCTCCATCCCCGCCACCAAGGG 77322 Query 19172 ATTCGAGATTGGCAGCGGGTTT 19193 ||||||||||| | |||| || Sbjct 77323 CTTCGAGATTGG-ATCGGGCTT 77343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107124674551109