Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F002105055.1_202017 -04-20] 177 sequences; 26,329,764 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq91 179 6e-39 seq161 149 1e-29 seq1 149 1e-29 seq108 89.7 8e-12 >seq91 Length=350055 Score = 179 bits (198), Expect = 6e-39 Identities = 198/261 (76%), Gaps = 2/261 (1%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||| ||||| || |||| ||| ||||||| |||||||| | | |||||| || Sbjct 141070 CTGGTCGACGTAGCGAGCGGTGTTGTTGTAGACGCGAAGCATGGGGATGATGCCGTTCGA 141011 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAG-C 2073658 | |||||| || || || | ||||| ||| | ||||| | ||||| | || || | Sbjct 141010 GTAGCCGTTCGTTCCGGCGATGTAGGAGCCAGTCGCGCGGATGTTGTG-GATGCTGAGTC 140952 Query 2073659 CGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCT 2073718 |||| || ||||| | |||||||||||| |||||| | || || || ||||||||||||| Sbjct 140951 CGATTCCTCCGGCGGTCTTGGAGATGAGGGCGCACGTCTTGAGGGTGTCGTAGATGCCCT 140892 Query 2073719 CGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGC 2073778 |||| || ||| |||||||| | || |||||||||||| || ||| | | || | Sbjct 140891 CGATGGAATCGTCCTTCATGGTGACGAGGAAGCACGACGAGAGCTGAGGGTGAGGGGTTC 140832 Query 2073779 CGGCATTGAAGAGCGTGGGCG 2073799 |||| |||||||| || |||| Sbjct 140831 CGGCGTTGAAGAGGGTCGGCG 140811 Score = 156 bits (172), Expect = 7e-32 Identities = 256/371 (69%), Gaps = 8/371 (2%) Strand=Plus/Minus Query 2071646 CGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACGATGGCCG 2071705 |||||||||||| ||||||| | || || ||||||| ||| ||| || |||||| Sbjct 141437 CGGCGTCCTTGTACAGCATGAAAGGGTTGCCGGTCTCGACCTGAGCCTCGAGGATGGCGT 141378 Query 2071706 ACCAAA---TTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNNNNNNNNNNNNNNN 2071762 |||| | ||||| || || | | || | ||||| |||| Sbjct 141377 ACCAGAGCTTTTGG---GCTGGGATGGTCTTCTTGGCGCGACCCTCCTTCTCGTACTGGG 141321 Query 2071763 NNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGACGGGC 2071822 ||||||| | || || |||||| | |||||| || ||||| ||||||| |||| Sbjct 141320 TGAAGAGGGCCTTGAACTCGTCGCCGTAGACCTCGTGGAGTCCGGGAGCCTCGGCGGGGC 141261 Query 2071823 AAAAGAGCGACCAGTCGCC-GCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTCCAC 2071881 | ||||| | ||||||||| ||| | | | || || ||| || |||||| |||| Sbjct 141260 AGAAGAGGGGCCAGTCGCCAGCCTG-CTCGACACGCTCCATGAAGAGGTCGGGAATCCAA 141202 Query 2071882 AGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCG 2071941 ||| || | |||||||| | || || ||||||||||||||||||||| |||||| Sbjct 141201 AGGGCGAAGAAGAGATCCCTAGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCG 141142 Query 2071942 AGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGC 2072001 || | |||| || |||||||||||| ||||| |||||| || ||||| || |||| Sbjct 141141 AGGAACTCGAAGATGTCGGCGTGCCAGGGCTCGAGGTAGATTGCGAAGGCTCCGGGGCGC 141082 Query 2072002 TTGCCGCCGCC 2072012 ||| ||| || Sbjct 141081 TTGTTGCCTCC 141071 Score = 87.8 bits (96), Expect = 3e-11 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 2070133 AACGCGTCGGCCAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGC 2070192 || || ||||| || |||||||| || | ||| || || ||||| || |||||||||| | Sbjct 141925 AAGGCATCGGCGAGACCCTGCACTCCAATGCCGATGGGGCGGTGACGAAGGTTCGAGTTC 141866 Query 2070193 CGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTG 2070243 |||||| || ||||||| ||||| ||||| | ||||||||||||| Sbjct 141865 TCGGCCTCCTTGACGGGGTAGTAGTTGACATCGATGATGCGGTTGAGGTTG 141815 >seq161 Length=98600 Score = 149 bits (164), Expect = 1e-29 Identities = 154/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 793940 CTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTT 793999 ||| |||||||||||||| | | ||| | ||| ||||| | | |||| ||| Sbjct 28860 CTTTCCCTCGAGCGAGATGAGGTTCATGAAGTCGAAGGGGTTCTCGACCTTGTAGACCTT 28801 Query 794000 CTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAG 794059 | ||||| || | || ||||||||||||||||| || ||||||||||||||||| Sbjct 28800 GGGGTTACCGAGGGAGACGAGAAGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAG 28741 Query 794060 GGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGAT 794119 || ||||||||| |||||||| | ||||| || | |||| ||| ||||| ||||| || Sbjct 28740 GGTGGCGTTCATTCCGATGAGGGAGACGGGGAGGGCCTCGGTGAGGAACTCCTTCTCAAT 28681 Query 794120 CTCGACGGCCTCGATGATGATC 794141 |||||||||||| |||||||| Sbjct 28680 CTCGACGGCCTCCTTGATGATC 28659 Score = 109 bits (120), Expect = 9e-18 Identities = 129/174 (74%), Gaps = 3/174 (2%) Strand=Plus/Minus Query 796189 AGGTTCTCAGCCACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAG 796248 |||||||| ||||| || ||| |||||||| |||||||||||||||| ||| ||| Sbjct 28028 AGGTTCTCGTTGACGATACCATCGGAAGCGGCGAAGAAGGCGAGGACGTGCTGGATGAAG 27969 Query 796249 TGACGCTCGTCGTCGCTGAGC---GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACC 796305 | |||||||| || ||||| | |||||| | | | || | ||||| | | Sbjct 27968 TAGCGCTCGTCCTCCTTGAGCTTGTTGTCCCAGTCGTGCATATCCTTGGAAAGGTCCATC 27909 Query 796306 TCCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGT 796359 ||||| |||||||| ||||| ||||||||||| |||||| | |||| ||| || Sbjct 27908 TCCTCAGCGGTCCAGAAGGAAGCCTCGGCCTTCTTGTACTGCGCCCAGATCTGT 27855 >seq1 Length=1516574 Score = 149 bits (164), Expect = 1e-29 Identities = 174/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 1485474 CTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGAT 1485533 |||||| ||||||||||| ||||| |||| ||||||| ||| || || ||| | | ||| Sbjct 1191203 CTTGGTAACGGCCTTGGTGCCCTCAGAGATGGCGTGCTTGGAAAGCTCTCCGGGGAGGAT 1191262 Query 1485534 CAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGC 1485593 ||||| || | ||||||||||| || | | ||| || ||||||| | || Sbjct 1191263 GAGGCGGACCGAAGTCTGGATCTCACGCGAGGAGATGGTCGACTTCTTGTTATAGGAAGC 1191322 Query 1485594 CAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGAT 1485653 || | ||||||| | ||||||| |||| ||||||||||| || ||||||| ||| Sbjct 1191323 GAGCTTGGAGGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAAGAGTTCAAGAT 1191382 Query 1485654 CGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 ||| | ||||||||||| || ||||||||| ||||||||||| |||||| Sbjct 1191383 AAGCATGGCCTTGTTGGAGATACCAGTGTCGGGGTGGACCTGCTTGAGGACCTTG 1191437 Score = 140 bits (154), Expect = 5e-27 Identities = 172/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 1485474 CTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGAT 1485533 |||||||||||||||||| ||||| || | || ||| ||| || |||||| | | ||| Sbjct 777102 CTTGGTGACGGCCTTGGTGCCCTCGGAAATCGCATGCTTGGAAAGCTCGCCGGGGAGGAT 777043 Query 1485534 CAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGC 1485593 ||||| || | ||||||||||| || | | ||| || |||||| | || Sbjct 777042 GAGGCGAACCGACGTCTGGATCTCACGCGAGGAGATGGTCGACTTCTTGTTGTAGGAAGC 776983 Query 1485594 CAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGAT 1485653 || | ||||||| ||||||| |||| ||||||||||| |||||||||| ||| Sbjct 776982 GAGCTTGGAGGCCTCGCCAGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCAGGAT 776923 Query 1485654 CGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 ||| | ||||||||||| || ||||||||| ||||||||||| |||||| Sbjct 776922 GAGCATGGCCTTGTTGGAGATTCCAGTGTCGGGGTGGACCTGCTTGAGGACCTTG 776868 Score = 96.9 bits (106), Expect = 5e-14 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 1485603 GGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGA 1485662 ||||||| | ||||||| |||| ||||||||||| || ||||||| || ||| | Sbjct 1049830 GGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAAGAGTTCAGAATGAGCATGGC 1049771 Query 1485663 TTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710 ||||||||||| || ||||||||| ||||||||||| |||||||| Sbjct 1049770 CTTGTTGGAGATTCCAGTGTCGGGGTGAACCTGCTTGAGGACCTTGTA 1049723 >seq108 Length=260371 Score = 89.7 bits (98), Expect = 8e-12 Identities = 119/163 (73%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 429067 TCAAGGGCAAGGAGGGCCGGATCCGCGGCAATTGCATGGGCAAGCGCGTCAACTTTACGG 429126 ||||||||||||| ||||| | ||||| || |||||||||||| ||| |||| | | Sbjct 2685 TCAAGGGCAAGGAAGGCCGACTTCGCGGTAACCTCATGGGCAAGCGAGTCGACTTCTCCG 2626 Query 429127 CGCGCGCCGTCATCAGTCCCGACCCCGAAATCGACATTGACGAGGTGGGCGTGCCCTATG 429186 | || ||||||||| || ||| | ||| | | ||||| || || || || || Sbjct 2625 CCCGAACCGTCATCACGGGAGATCCCAACCTCGCCCTCGACGAAGTCGGAGTCCCTTACT 2566 Query 429187 AGATCG-TCAAGACGCTCACCTTTCCCGAGCGCGTGACGCCCT 429228 ||||| || || ||||||| ||||||||||| ||||||| Sbjct 2565 CGATCGCTCGTAAC-CTCACCTACCCCGAGCGCGTAACGCCCT 2524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916227571702703