Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F002105055.1_202017 -04-20] 177 sequences; 26,329,764 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq91 199 6e-45 seq161 123 4e-22 seq1 118 2e-20 >seq91 Length=350055 Score = 199 bits (220), Expect = 6e-45 Identities = 220/291 (76%), Gaps = 4/291 (1%) Strand=Plus/Plus Query 259894 CATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCG 259953 ||||||| ||| | |||||| || |||| || ||||| || ||||| || || | Sbjct 140782 CATGTCGGAGCGCTACTTCACCCACGCCTCGCCGACCCTCTTCAACGCCGGAACCCCTCA 140841 Query 259954 CCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTA 260013 ||| ||| ||||||||||| || | |||||||| |||||| |||||||||||||| Sbjct 140842 CCCTCAGCTCTCGTCGTGCTTCCTCGTCACCATGAAGGACGATTCCATCGAGGGCATCTA 140901 Query 260014 TGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGC 260073 ||||| |||||| |||||| |||||||||||| | ||||| || ||||| | | || Sbjct 140902 CGACACCCTCAAGACGTGCGCCCTCATCTCCAAGACCGCCGGAGGAATCGGACT--CAGC 140959 Query 260074 A--CACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGC 260131 | ||||| | ||||| | ||| ||||| | || || || |||||| | || |||||| Sbjct 140960 ATCCACAACATCCGCGCGACTGGCTCCTACATCGCCGGAACGAACGGCTACTCGAACGGC 141019 Query 260132 CTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 | | |||||||||||||| | ||| |||| || ||||||||||||||| Sbjct 141020 ATCATCCCCATGCTTCGCGTCTACAACAACACCGCTCGCTACGTCGACCAG 141070 Score = 100 bits (110), Expect = 4e-15 Identities = 177/254 (70%), Gaps = 8/254 (3%) Strand=Plus/Plus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 || ||| ||||||| || ||||| || |||||| || || |||||||||||| || Sbjct 141071 GGAGGCAACAAGCGCCCCGGAGCCTTCGCAATCTACCTCGAGCCCTGGCACGCCGACATC 141130 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 || | | || |||||| |||||||||||||| ||||| || |||| | Sbjct 141131 TTCGAGTTCCTCGACCTCCGCAAGAACCACGGCAA-GGAGGAGG-----TTCGCGCTAGG 141184 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGC-CG 261966 |||||||| | || ||| |||| |||||| || ||| || | | | | ||| | Sbjct 141185 GATCTCTTCTTCGCCCTTTGGATTCCCGACCTCTTCATGGAGCGTGTCGAG-CAGGCTGG 141243 Query 261967 CGACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGC 262026 ||||||| | ||||| ||||| ||||||| ||||| || ||||| ||| |||| | Sbjct 141244 CGACTGGCCCCTCTTCTGCCCCGCCGAGGCTCCCGGACTCCACGAGGTCTACGGCGACGA 141303 Query 262027 CTTTGACGCCCTCT 262040 || | ||||||| Sbjct 141304 GTTCAAGGCCCTCT 141317 >seq161 Length=98600 Score = 123 bits (136), Expect = 4e-22 Identities = 105/127 (83%), Gaps = 2/127 (2%) Strand=Plus/Plus Query 1456522 GATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGC 1456581 ||||||| |||||||||||||| ||||| ||||| ||| |||| | || || || | Sbjct 28659 GATCATCAAGGAGGCCGTCGAGATTGAGAAGGAGTTCCTCACCGAGGCCCTCCCCGTCTC 28718 Query 1456582 GCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGC 1456641 |||||||| |||||||||||| ||||||||||||||||| | | || |||||||||||| Sbjct 28719 CCTCATCGGAATGAACGCCACC-CTCATGTGCCAGTACATCG-AGTTCGTCGCCGACCGC 28776 Query 1456642 CTGCTCG 1456648 || |||| Sbjct 28777 CTTCTCG 28783 Score = 105 bits (116), Expect = 1e-16 Identities = 157/221 (71%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 1455791 CAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGT 1455850 ||| ||||||||||| ||||| |||||||| |||||| | ||||| | || | | Sbjct 27873 CAAGAAGGCCGAGGCTTCCTTCTGGACCGCTGAGGAGATGGACCTTTCCAAGGATATGCA 27932 Query 1455851 CCACTGGG---TGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTT 1455907 | |||||| ||| | || ||||||||| | |||||| |||||||||||||| | Sbjct 27933 CGACTGGGACAACAAGCTCAAGGAGGACGAGCGCTACTTCATCCAGCACGTCCTCGCC-T 27991 Query 1455908 TTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGG 1455967 | |||||||| |||||| ||||| ||||||||| || || || | |||| Sbjct 27992 TCTTCGCCGCTTCCGATGGTATCGTCAACGAGAACCTCCTCGAGCGTTTCTCGTCCGAGG 28051 Query 1455968 TCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008 | || | | ||||| |||| || ||||| ||||| ||| Sbjct 28052 TTCAGTGCGCCGAGGCTCGTTGCTTCTACGGATTCCAAATC 28092 >seq1 Length=1516574 Score = 118 bits (130), Expect = 2e-20 Identities = 164/227 (72%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 724916 CAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATGTC 724975 |||||| ||||||||||| |||||| || ||| ||| ||||||||| ||||| Sbjct 776868 CAAGGTCCTCAAGCAGGTCCACCCCGACAC---TGGA--ATC-TCCAACAAGGCCATGCT 776921 Query 724976 GATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCT 725035 ||| |||||||||| ||||||||||| |||| ||||||| ||||||| || Sbjct 776922 CATCCTGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCTGGCGAGGCCTCCAAGCT 776981 Query 725036 GGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCT 725095 || || ||||||| || ||| | |||| ||||||||||| | || ||||| Sbjct 776982 CGCTTCCTACAACAAGAAGTCGACCATCTCCTCGCGTGAGATCCAGACGTCGGTTCGCCT 777041 Query 725096 GATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | | |||||| || ||| ||| || | ||||||||||||| Sbjct 777042 CATCCTCCCCGGCGAGCTTTCCAAGCATGCGATTTCCGAGGGCACCA 777088 Score = 118 bits (130), Expect = 2e-20 Identities = 166/231 (72%), Gaps = 14/231 (6%) Strand=Plus/Minus Query 724916 CAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATGTC 724975 |||||| ||||||||||| |||||| || | | ||| ||||||||| ||||| Sbjct 1191437 CAAGGTCCTCAAGCAGGTCCACCCCGACACTGGT-----ATC-TCCAACAAGGCCATGCT 1191384 Query 724976 GATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCT 725035 ||| ||||||| || ||||||||||| |||| ||||||| | |||||| | || Sbjct 1191383 TATCTTGAACTCTTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGC----CTCCA 1191328 Query 725036 GGCGCGCTCC----AACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091 || |||| | |||||| || ||| | |||| ||||||||||| | || | Sbjct 1191327 AGCTCGCTTCCTATAACAAGAAGTCGACCATCTCCTCGCGTGAGATCCAGACTTCGGTCC 1191268 Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||| ||| | | ||| || || ||| ||||||| |||| |||||||||| Sbjct 1191267 GCCTCATCCTCCCCGGAGAGCTTTCCAAGCACGCCATCTCTGAGGGCACCA 1191217 Score = 93.3 bits (102), Expect = 6e-13 Identities = 136/189 (72%), Gaps = 14/189 (7%) Strand=Plus/Plus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 ||||| || | ||||||||||| ||||||||||| |||||| || ||| ||| Sbjct 1049708 TACTCCTCGTACATCTACAAGGTCCTCAAGCAGGTTCACCCCGACAC---TGGA--ATC- 1049761 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 ||||||||| ||||| || ||||||| || ||||||||||| |||| ||||||| | Sbjct 1049762 TCCAACAAGGCCATGCTCATTCTGAACTCTTTCGTCAACGACATCTTCGAGCGCATCGCC 1049821 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGC----TCCAACAAGCGCAACACGATCGGCACGCGCGA 725074 |||||| | || || ||| | ||||||| || ||| | ||||||| Sbjct 1049822 GGCGAGGC----CTCCAAGCTCGCTTCTTACAACAAGAAGTCGACCATCTCCTCGCGCGA 1049877 Query 725075 GATCCAGAC 725083 ||||||||| Sbjct 1049878 GATCCAGAC 1049886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177794128024674