Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F002105055.1_202017 -04-20] 177 sequences; 26,329,764 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq139 98.7 3e-15 seq136 96.9 1e-14 seq10 86.0 2e-11 >seq139 Length=125316 Score = 98.7 bits (108), Expect = 3e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || ||||| |||||||| ||||| || || || || || || || | || || || || Sbjct 15369 AGCACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 15428 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || |||||||| ||||| ||||| ||||||||||| || ||||| || || ||| Sbjct 15429 TCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCAGGGGGGATTCCCTCCTTGTCC 15488 Query 140646 TGAATTTTAGCTTTTAC 140662 || || || || || || Sbjct 15489 TGGATCTTGGCCTTGAC 15505 >seq136 Length=130718 Score = 96.9 bits (106), Expect = 1e-14 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||| | | ||||| || |||||||| ||||| || || || || || || || Sbjct 71205 CCACCACGGAGACGGAGAACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAG 71264 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | || || || || || || || || || || ||||| | || ||||| || ||||| Sbjct 71265 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGG 71324 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 ||||| || || ||||| || || || || || || || || | || || | || || Sbjct 71325 ATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACC 71384 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAG 140716 || || || | ||||||||||| || Sbjct 71385 TCGAGGGTGATGGTCTTTCCGGTGAG 71410 >seq10 Length=56356 Score = 86.0 bits (94), Expect = 2e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || ||||| ||||| || ||||| || || || || || || || | || || || || Sbjct 7753 AGGACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 7694 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || || || ||||| ||||||||||| ||||| || ||||| || || ||| Sbjct 7693 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCAGGGGGGATTCCCTCCTTGTCC 7634 Query 140646 TGAATTTTAGCTTTTAC 140662 || || || || || || Sbjct 7633 TGGATCTTGGCCTTGAC 7617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515250963687131