Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F002105055.1_202017 -04-20] 177 sequences; 26,329,764 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq136 154 2e-32 seq139 127 2e-24 seq10 107 2e-18 >seq136 Length=130718 Score = 154 bits (170), Expect = 2e-32 Identities = 163/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27419 TCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAA 27478 |||| | || || |||||||| || || || ||||||||||| || | ||| | | Sbjct 72667 TCAAAGCCCTCACTGGCAAGACCATCACCCTCGAGGTTGAGTCGTCCGACACCATCGACA 72608 Query 27479 ATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTT 27538 | | ||||| || || ||||||||||||||||| ||||| ||||||||||| | || | Sbjct 72607 ACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCTTGATCT 72548 Query 27539 TTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAAT 27598 | || || ||||| |||||||| | || ||||| | ||||| || |||| ||||| | Sbjct 72547 TCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGT 72488 Query 27599 CCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | |||||||| || || | ||||||||||||||| Sbjct 72487 CGACTCTTCACCTCGTTCTCCGTCTTCGCGGTGGA 72453 Score = 149 bits (164), Expect = 7e-31 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 27427 CTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAG 27486 || || || ||||| || || || ||||| ||||| || | ||| | || | ||| Sbjct 71721 CTCACTGGAAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACCATCGACAACGTCAAG 71662 Query 27487 GCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGT 27546 || || || ||||||||||||||||| ||||| ||||||||||| | || || || || Sbjct 71661 GCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCTTGATCTTCGCCGGC 71602 Query 27547 AAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTT 27606 ||||| |||||||| | |||||||| | ||||| || |||| ||||| || |||||| Sbjct 71601 AAGCAGCTCGAGGACGGCCGTACCCTTTCGGACTACAACATCCAGAAGGAGTCGACTCTT 71542 Query 27607 CATCTAGTCTTGCGTCTTCGCGGTGGA 27633 || || ||| | |||||||| |||||| Sbjct 71541 CACCTCGTCCTTCGTCTTCGTGGTGGA 71515 Score = 143 bits (158), Expect = 3e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 27427 CTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAG 27486 || || || ||||| || || || ||||| ||||| || | ||| | || | || Sbjct 72034 CTCACTGGAAAGACCATCACCCTCGAGGTCGAGTCTTCCGACACCATCGACAACGTCAAA 71975 Query 27487 GCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGT 27546 || || || ||||||||||||||||| ||||| ||||||||||| | || || || || Sbjct 71974 GCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCTTGATCTTCGCCGGC 71915 Query 27547 AAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTT 27606 ||||| |||||||| | |||||||| | ||||| || |||| ||||| || |||||| Sbjct 71914 AAGCAGCTCGAGGACGGCCGTACCCTTTCGGACTACAACATCCAGAAGGAGTCGACTCTT 71855 Query 27607 CATCTAGTCTTGCGTCTTCGCGGTGGA 27633 || || ||| | |||||||| |||||| Sbjct 71854 CACCTCGTCCTTCGTCTTCGTGGTGGA 71828 Score = 140 bits (154), Expect = 4e-28 Identities = 155/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 27427 CTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAG 27486 || ||||| ||||| || || || ||||| ||||| || | ||| | || | ||| Sbjct 71410 CTCACCGGAAAGACCATCACCCTCGAGGTCGAGTCTTCCGACACCATCGACAACGTCAAG 71351 Query 27487 GCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGT 27546 || || || ||||||||||||||||| ||||| ||||||||||| | || || || || Sbjct 71350 GCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCTTGATCTTCGCCGGC 71291 Query 27547 AAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTT 27606 ||||| |||||||| | || ||||| | ||||| || |||| ||||| || |||||| Sbjct 71290 AAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACTCTT 71231 Query 27607 CATCTAGTCTTGCGTCTTCGCGGTGGA 27633 || || || | ||||| || |||||| Sbjct 71230 CACCTCGTTCTCCGTCTCCGTGGTGGA 71204 Score = 131 bits (144), Expect = 2e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 27427 CTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAG 27486 || || || ||||| || || || ||||| ||||| || | ||| | || | ||| Sbjct 72344 CTCACTGGAAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACCATCGACAACGTCAAG 72285 Query 27487 GCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGT 27546 || || || ||||||||||||||||| ||||| ||||||||||| | || || || || Sbjct 72284 GCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCTTGATCTTCGCCGGC 72225 Query 27547 AAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTT 27606 ||||| |||||||| | || ||||| | ||||| || |||| ||||| || || || Sbjct 72224 AAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTC 72165 Query 27607 CATCTAGTCTTGCGTCTTCGCGGTGGA 27633 || || || | |||||||| |||||| Sbjct 72164 CACCTCGTTCTCCGTCTTCGTGGTGGA 72138 Score = 122 bits (134), Expect = 1e-22 Identities = 117/150 (78%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 27484 AAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCT 27543 ||||| || || ||||||||||||||||| ||||| ||||||||||| | || || || Sbjct 72916 AAGGCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCTTGATCTTCGCC 72857 Query 27544 GGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACT 27603 || ||||| |||||||| | || ||||| | ||||| || |||| ||||| || || Sbjct 72856 GGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACC 72797 Query 27604 CTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 || || || ||| | |||||||| |||||| Sbjct 72796 CTCCACCTCGTCCTCCGTCTTCGTGGTGGA 72767 >seq139 Length=125316 Score = 127 bits (140), Expect = 2e-24 Identities = 118/150 (79%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 27484 AAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCT 27543 ||||| || || ||||||||||||||||| || || || ||||||||||| || || ||| Sbjct 15502 AAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGATCAGCAGCGTCTCATCTTCGCT 15443 Query 27544 GGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACT 27603 || ||||| |||||||| | || ||||| | ||||| || |||| ||||| || ||| Sbjct 15442 GGAAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACT 15383 Query 27604 CTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 ||||| || || | |||||||| || ||| Sbjct 15382 CTTCACCTTGTGCTCCGTCTTCGTGGAGGA 15353 >seq10 Length=56356 Score = 107 bits (118), Expect = 2e-18 Identities = 103/132 (78%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 27484 AAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCT 27543 ||||| || || ||||||||||||||||| || || |||||||| ||||| || || || Sbjct 7620 AAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAGCAACGTCTCATCTTCGCC 7679 Query 27544 GGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACT 27603 || ||||| |||||||| | || ||||| | ||||| || |||| ||||| || || Sbjct 7680 GGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACC 7739 Query 27604 CTTCATCTAGTC 27615 ||||| || ||| Sbjct 7740 CTTCACCTTGTC 7751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309138188240