Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F002105055.1_202017 -04-20] 177 sequences; 26,329,764 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq136 187 6e-42 seq10 136 9e-27 seq139 129 1e-24 seq91 96.9 8e-15 >seq136 Length=130718 Score = 187 bits (206), Expect = 6e-42 Identities = 162/201 (81%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| ||||||||||| ||||| || |||||||| || |||| |||||| Sbjct 71834 ACGAAGACGAAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGT 71893 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || || ||||||||||| |||||||| | ||| || ||||| ||||| | ||| Sbjct 71894 ACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATTCC 71953 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||| ||| ||||| ||||||||||| || || |||||||| Sbjct 71954 CTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAG 72013 Query 211073 AGTGATCGTCTTTCCCGTGAG 211093 ||||| |||||||| ||||| Sbjct 72014 GGTGATGGTCTTTCCAGTGAG 72034 Score = 183 bits (202), Expect = 7e-41 Identities = 161/201 (80%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| ||||||||||| ||||| || |||||||| || |||| |||||| Sbjct 71521 ACGAAGACGAAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGT 71580 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || || ||||||||||| |||||||| | ||| || ||||| ||||| | ||| Sbjct 71581 ACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATTCC 71640 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||| || ||||| ||||||||||| || || |||||||| Sbjct 71641 CTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCGAG 71700 Query 211073 AGTGATCGTCTTTCCCGTGAG 211093 ||||| |||||||| ||||| Sbjct 71701 GGTGATGGTCTTTCCAGTGAG 71721 Score = 172 bits (190), Expect = 1e-37 Identities = 158/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | || || ||||||||||| ||||| || |||||||| || |||| ||||| Sbjct 72460 CGAAGACGGAGAACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTG 72519 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | || || || ||||||||||| |||||||| | ||| || ||||| ||||| | ||| Sbjct 72520 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATTCCC 72579 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||||||||||||||| || ||||| ||||||||||| || ||||||||||| Sbjct 72580 TCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGACGACTCAACCTCGAGG 72639 Query 211074 GTGATCGTCTTTCCCGTGAG 211093 ||||| ||||| || ||||| Sbjct 72640 GTGATGGTCTTGCCAGTGAG 72659 Score = 168 bits (186), Expect = 2e-36 Identities = 152/191 (80%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||||||||| ||||| || |||||||| || |||| ||||| | || || Sbjct 71220 AGAACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCC 71279 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| | ||| || ||||| ||||| | ||| ||||||||| Sbjct 71280 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCC 71339 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||||||||| || || |||||||| ||||| ||| Sbjct 71340 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGGGTGATGGTC 71399 Query 211083 TTTCCCGTGAG 211093 ||||| ||||| Sbjct 71400 TTTCCGGTGAG 71410 Score = 165 bits (182), Expect = 2e-35 Identities = 157/201 (78%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || ||||| || || ||||| || |||||||| || |||| ||||| Sbjct 72144 ACGAAGACGGAGAACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGT 72203 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || || ||||||||||| |||||||| | ||| || ||||| ||||| | ||| Sbjct 72204 GCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATTCC 72263 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||| || ||||| ||||||||||| || || |||||||| Sbjct 72264 CTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCGAG 72323 Query 211073 AGTGATCGTCTTTCCCGTGAG 211093 ||||| |||||||| ||||| Sbjct 72324 GGTGATGGTCTTTCCAGTGAG 72344 Score = 123 bits (136), Expect = 6e-23 Identities = 110/138 (80%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| ||||| || || ||||| || |||||||| || |||| ||||| Sbjct 72773 ACGAAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGT 72832 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || || ||||||||||| |||||||| | ||| || ||||| ||||| | ||| Sbjct 72833 GCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATTCC 72892 Query 211013 TTCCTTGTCCTGGATCTT 211030 ||||||||||||||||| Sbjct 72893 CTCCTTGTCCTGGATCTT 72910 >seq10 Length=56356 Score = 136 bits (150), Expect = 9e-27 Identities = 107/128 (84%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||||||||| || ||||| || |||||||| || |||| |||||| | || || Sbjct 7753 AGGACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 7694 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || ||||| |||||||| || | ||| ||||||||| Sbjct 7693 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCAGGGGGGATTCCCTCCTTGTCC 7634 Query 211023 TGGATCTT 211030 |||||||| Sbjct 7633 TGGATCTT 7626 >seq139 Length=125316 Score = 129 bits (142), Expect = 1e-24 Identities = 113/141 (80%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || |||||| | || |||||||||||||| ||||| || |||||||| || |||| ||| Sbjct 15356 TCCACGAAGACGGAGCACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAG 15415 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 ||| | || || || |||||||| || |||||||| || || || || ||||| || | Sbjct 15416 GGTGCGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCAGGGGGGAT 15475 Query 211010 TCCTTCCTTGTCCTGGATCTT 211030 ||| ||||||||||||||||| Sbjct 15476 TCCCTCCTTGTCCTGGATCTT 15496 >seq91 Length=350055 Score = 96.9 bits (106), Expect = 8e-15 Identities = 169/246 (69%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 178120 GGCATCTTTGTACGCAATGAAGGGCATTCCCACCTCAGCTTGAGCCACGAGAATGTGATG 178179 ||| || |||||| ||||| || | || ||| | |||||| |||| ||| | Sbjct 141436 GGCGTCCTTGTACAGCATGAAAGGGTTGCCGGTCTCGACCTGAGCCTCGAGGATGGCGTA 141377 Query 178180 CCAAAGCTCCTGGGCTCGGACAGTCTTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTA 178239 ||| |||| |||||| ||| ||||| ||||| || || |||||||||| || | Sbjct 141376 CCAGAGCTTTTGGGCTGGGATGGTCTTCTTGGCGCGACCCTCCTTCTCGTACTGGGTGAA 141317 Query 178240 GAGCTCCTCGAATTCCGGTCCATAGACATCATCGAGACCGGGAGCCTCATTGGGGCAGAA 178299 ||| ||| ||| || || ||||| || | ||| ||||||||||| ||||||||| Sbjct 141316 GAGGGCCTTGAACTCGTCGCCGTAGACCTCGTGGAGTCCGGGAGCCTCGGCGGGGCAGAA 141257 Query 178300 GAGACTCCACTGACCGTCTTCCTTCACTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGC 178359 ||| ||| | || | | || || || | |||||||||||| | |||| | ||| Sbjct 141256 GAGGGGCCAGTCGCCAGCCTGCTCGACACGCTCCATGAAGAGGTCGGGAATCCAAAGGGC 141197 Query 178360 ATAGAA 178365 |||| Sbjct 141196 GAAGAA 141191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159149371260605